| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89054055
Identifier: 89054055
GI number: 89054055
Start: 1540384
End: 1540848
Strand: Direct
Name: 89054055
Synonym: Jann_1564
Alternate gene names: NA
Gene position: 1540384-1540848 (Clockwise)
Preceding gene: 89054054
Following gene: 89054056
Centisome position: 35.67
GC content: 60.0
Gene sequence:
>465_bases ATGAATGATCTTCCCCGCACCCAGCATATCATAGCCTCCGGCGTCATTGCCGCCGTGGGTGTCACGGTGGCGGTCATCAG CTTCACGCAGGACCCGGCGCAGGCCTATCTGTTCCCGCGCATGATCTCATCGGTCTTTGCCGTGCTGGCGCTGTGGACGT TTGGCAAGGCGCTGATGGGGCGCACGAAGGTGGGCAACGGGTTGTCCGGCGCGGCGATGCGCAACATGGCCCCCGGTCTG GTCGTCCTGCTGGTCTATACCTTCTGGGCCGCCAAGGCTCTGGGCTTCTATACAGCGACCACGATTGCGGTGTTTATCCT GATATCCCTTTACGATCCCGCGCCCCACACATCACCCAAGACGTGGGGCAAACGTATCCTAATCACCGCCGGGTTCATGG CGGTCATGTATGGCCTGTTCGCATTGGTGTTGAACGTGTTCACACCGCGAGAGGTCTTTTTCTGA
Upstream 100 bases:
>100_bases TGAACTGGTTGCTGATCGCCATCGTCGTGGCCTCGGTCAGCTATTCCGTCTGGATGGAGCTGCGCGCGCGTCGCTACACC ACGAAAGAGGAGGTCACGGG
Downstream 100 bases:
>100_bases CCCGTCGGTTTAGCCCACGAGACAGTGGGCGAACGGGCGGCAGATCCAATCTCAGGGAGGAGACTAAGATGAAAAAGTTG ATAGCAGGGGCCGCGATGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 154; Mature: 154
Protein sequence:
>154_residues MNDLPRTQHIIASGVIAAVGVTVAVISFTQDPAQAYLFPRMISSVFAVLALWTFGKALMGRTKVGNGLSGAAMRNMAPGL VVLLVYTFWAAKALGFYTATTIAVFILISLYDPAPHTSPKTWGKRILITAGFMAVMYGLFALVLNVFTPREVFF
Sequences:
>Translated_154_residues MNDLPRTQHIIASGVIAAVGVTVAVISFTQDPAQAYLFPRMISSVFAVLALWTFGKALMGRTKVGNGLSGAAMRNMAPGL VVLLVYTFWAAKALGFYTATTIAVFILISLYDPAPHTSPKTWGKRILITAGFMAVMYGLFALVLNVFTPREVFF >Mature_154_residues MNDLPRTQHIIASGVIAAVGVTVAVISFTQDPAQAYLFPRMISSVFAVLALWTFGKALMGRTKVGNGLSGAAMRNMAPGL VVLLVYTFWAAKALGFYTATTIAVFILISLYDPAPHTSPKTWGKRILITAGFMAVMYGLFALVLNVFTPREVFF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16651; Mature: 16651
Theoretical pI: Translated: 10.64; Mature: 10.64
Prosite motif: PS00104 EPSP_SYNTHASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDLPRTQHIIASGVIAAVGVTVAVISFTQDPAQAYLFPRMISSVFAVLALWTFGKALMG CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC RTKVGNGLSGAAMRNMAPGLVVLLVYTFWAAKALGFYTATTIAVFILISLYDPAPHTSPK HHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH TWGKRILITAGFMAVMYGLFALVLNVFTPREVFF HHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCC >Mature Secondary Structure MNDLPRTQHIIASGVIAAVGVTVAVISFTQDPAQAYLFPRMISSVFAVLALWTFGKALMG CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC RTKVGNGLSGAAMRNMAPGLVVLLVYTFWAAKALGFYTATTIAVFILISLYDPAPHTSPK HHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH TWGKRILITAGFMAVMYGLFALVLNVFTPREVFF HHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA