| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is sam [H]
Identifier: 89054039
GI number: 89054039
Start: 1519482
End: 1520357
Strand: Reverse
Name: sam [H]
Synonym: Jann_1548
Alternate gene names: 89054039
Gene position: 1520357-1519482 (Counterclockwise)
Preceding gene: 89054040
Following gene: 89054038
Centisome position: 35.21
GC content: 54.79
Gene sequence:
>876_bases ATGACCGGACCGGCGACTAATCCCTCGTCAGGTCTTTTCATGATGACCATCGGCGTTGCAGCGCTTTCCGTGAACGATGC AATGGCAAAAGCCCTGGCCGATGCGTACTCGCCGTTGCAGATCCTCTTTCTTCGCAATGTCATCGCACTTCCTATCGCGC TGTCGTTTGCGCTGCACATGCAGGGTAAAACTGCTCTGAGATCAAAGACGCCCGTTGTTCATCTGCTGCGCGGATTCTTC TGGGTGGTGGCGACCTACCTGTTCTTTACCAGCATCACTCATTTGGGACTTGCCAAATCCACGGCGCTTATCTTTCTGGC ACCGCTGCTGATCGTTGCAATCGCCGCGTTGTTTCTAGGTGAACATGCGGATTGGCGCCGCTGGTGTGTTGTCGCGCTGG GGTTCTTCGGGGCCATGATTATCATCCGCCCCGGCATGTCTGGATTTGATCCCATTGCGTGGATGCCGGTTGCAGCGGCA CTTATGGCCGCGTTCCTAATGCTCAGCGCACGCATGGTTGATCCCCATGAAAGTTTCTGGACATTGCTACTGTACCTGAC GGGGTCAAGTGCATTGATCAGCGCCATCATTGTCCCGTTTGTCTGGATTCCAGTGCAAGTTACGCACCTGTGGTTGTTTC TGGGTGTCGCACTTTTTGGCACTGCCGGAATGGTTCTGATGACCCAGGCCTTTCGCATCGCACCCGCCACACTTATTGCG CCTCTGGATTATTCTGCTCTGGTCTGGGCCAGCCTGTTCGGCTGGTGGTTCTGGCAAGAGATACCCGATAGGTTAACCTA CATCGGTGCGGCAGTTATTGTGGCGAGTGGCTTGCTCAACATCTTCACTGATCGCGAAAAAACGGAGCCGGGTTGA
Upstream 100 bases:
>100_bases GAAACGGCCCTGAGGCGACCGCACAAAAGGCGGACCGCGTGCGGTGTGTCGCCCATACGGAGATTAATGAAGTAGACCCG ACGCAGGATGGTTCAGAACA
Downstream 100 bases:
>100_bases GACATGATGCGGACGTCTCGTCCGGGGTTTTGTCTTTACATATCAATGTCTGCTTTGCGGAAGCTGCGTGGCAGCGCTGG ACTTCGTTGTAAGCGTCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 291; Mature: 290
Protein sequence:
>291_residues MTGPATNPSSGLFMMTIGVAALSVNDAMAKALADAYSPLQILFLRNVIALPIALSFALHMQGKTALRSKTPVVHLLRGFF WVVATYLFFTSITHLGLAKSTALIFLAPLLIVAIAALFLGEHADWRRWCVVALGFFGAMIIIRPGMSGFDPIAWMPVAAA LMAAFLMLSARMVDPHESFWTLLLYLTGSSALISAIIVPFVWIPVQVTHLWLFLGVALFGTAGMVLMTQAFRIAPATLIA PLDYSALVWASLFGWWFWQEIPDRLTYIGAAVIVASGLLNIFTDREKTEPG
Sequences:
>Translated_291_residues MTGPATNPSSGLFMMTIGVAALSVNDAMAKALADAYSPLQILFLRNVIALPIALSFALHMQGKTALRSKTPVVHLLRGFF WVVATYLFFTSITHLGLAKSTALIFLAPLLIVAIAALFLGEHADWRRWCVVALGFFGAMIIIRPGMSGFDPIAWMPVAAA LMAAFLMLSARMVDPHESFWTLLLYLTGSSALISAIIVPFVWIPVQVTHLWLFLGVALFGTAGMVLMTQAFRIAPATLIA PLDYSALVWASLFGWWFWQEIPDRLTYIGAAVIVASGLLNIFTDREKTEPG >Mature_290_residues TGPATNPSSGLFMMTIGVAALSVNDAMAKALADAYSPLQILFLRNVIALPIALSFALHMQGKTALRSKTPVVHLLRGFFW VVATYLFFTSITHLGLAKSTALIFLAPLLIVAIAALFLGEHADWRRWCVVALGFFGAMIIIRPGMSGFDPIAWMPVAAAL MAAFLMLSARMVDPHESFWTLLLYLTGSSALISAIIVPFVWIPVQVTHLWLFLGVALFGTAGMVLMTQAFRIAPATLIAP LDYSALVWASLFGWWFWQEIPDRLTYIGAAVIVASGLLNIFTDREKTEPG
Specific function: Transports S-adenosylmethionine [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the drug/metabolite transporter (DMT) superfamily. 10 TMS drug/metabolite exporter (TC 2.A.7.3) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 31718; Mature: 31587
Theoretical pI: Translated: 9.05; Mature: 9.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGPATNPSSGLFMMTIGVAALSVNDAMAKALADAYSPLQILFLRNVIALPIALSFALHM CCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH QGKTALRSKTPVVHLLRGFFWVVATYLFFTSITHLGLAKSTALIFLAPLLIVAIAALFLG CCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC EHADWRRWCVVALGFFGAMIIIRPGMSGFDPIAWMPVAAALMAAFLMLSARMVDPHESFW CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHH TLLLYLTGSSALISAIIVPFVWIPVQVTHLWLFLGVALFGTAGMVLMTQAFRIAPATLIA HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCHHHHCC PLDYSALVWASLFGWWFWQEIPDRLTYIGAAVIVASGLLNIFTDREKTEPG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure TGPATNPSSGLFMMTIGVAALSVNDAMAKALADAYSPLQILFLRNVIALPIALSFALHM CCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH QGKTALRSKTPVVHLLRGFFWVVATYLFFTSITHLGLAKSTALIFLAPLLIVAIAALFLG CCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC EHADWRRWCVVALGFFGAMIIIRPGMSGFDPIAWMPVAAALMAAFLMLSARMVDPHESFW CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHH TLLLYLTGSSALISAIIVPFVWIPVQVTHLWLFLGVALFGTAGMVLMTQAFRIAPATLIA HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCHHHHCC PLDYSALVWASLFGWWFWQEIPDRLTYIGAAVIVASGLLNIFTDREKTEPG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA