Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89054032

Identifier: 89054032

GI number: 89054032

Start: 1511626

End: 1512327

Strand: Direct

Name: 89054032

Synonym: Jann_1541

Alternate gene names: NA

Gene position: 1511626-1512327 (Clockwise)

Preceding gene: 89054031

Following gene: 89054035

Centisome position: 35.01

GC content: 53.28

Gene sequence:

>702_bases
TTGCGCTTCCTGGTTGTTGAGTATCTTCCGGCGTGTGAAGTTTCACGCATGAGCTGCTTCAGAAATCTGATGGTTTTCCT
ACTTGCCCTGACGCCGGTGCCGTCACTGGCAGATGGGCACAGGATTGTTTTGTCCGAAGACTTTGGCTTGTCCGCTGTGT
GTTGGGAAAGCCCGTATGAACACGGTTGGGAAGATTTCTCTGATCACTCAACTGTCGCTCAGGCACGGTACGACCTCTGG
GTGCTCGATCCGCCACCGCCACCAGCCGTCCGTTTTTATGAGGAGCCTATTCAGTTTCGCCTAACCGTAGGTGGATGGCC
TTGTTACTACGAGTATGGCAACCACCGTTACCGAGGCGCGGGGACTTTGCTTACCTCCACCGTCCCAACGCGATACATTG
AGGTGGATGGCCGCAACTTCCCCTATACGGTCGATCCGAACATCATTGTCCCTATCATCCGACTACTGGTCTCACAATGT
GAGCAATCGTATCCTCAACCGTGGCCTTTCACTCATCTCTTGCCTATCGGTCGAGACTGCGAACGAGAGGTTTCAGACAT
ACTATTGGTAGAGACTACGGCGGTGCAGATTTACCTAGATCCCAATGCACCTGATACCTTCGAGACGGTCGTGTTCGTGC
AAGGTGTGCCTTATCTAAATGGCGAGCCATTGGTGGACCCGGCCGTGATAGGATTGCGTTGA

Upstream 100 bases:

>100_bases
TGTTGTATCAGTAGTTTGATTTAGAGAAGCACTTAGCTGCTAATAACATAATACGAATTATAGGTCATATATACTGACAT
AAAATCCTTGCCCCTTTTCT

Downstream 100 bases:

>100_bases
TCGGAGCTCTGGGTGTCGAATTAACATAACGCCCATCTCGGGCATCCATGCTTGTAAAGCGGGACTGTCCGTACAATTGC
CCTTAGTGCTCACGCTTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MRFLVVEYLPACEVSRMSCFRNLMVFLLALTPVPSLADGHRIVLSEDFGLSAVCWESPYEHGWEDFSDHSTVAQARYDLW
VLDPPPPPAVRFYEEPIQFRLTVGGWPCYYEYGNHRYRGAGTLLTSTVPTRYIEVDGRNFPYTVDPNIIVPIIRLLVSQC
EQSYPQPWPFTHLLPIGRDCEREVSDILLVETTAVQIYLDPNAPDTFETVVFVQGVPYLNGEPLVDPAVIGLR

Sequences:

>Translated_233_residues
MRFLVVEYLPACEVSRMSCFRNLMVFLLALTPVPSLADGHRIVLSEDFGLSAVCWESPYEHGWEDFSDHSTVAQARYDLW
VLDPPPPPAVRFYEEPIQFRLTVGGWPCYYEYGNHRYRGAGTLLTSTVPTRYIEVDGRNFPYTVDPNIIVPIIRLLVSQC
EQSYPQPWPFTHLLPIGRDCEREVSDILLVETTAVQIYLDPNAPDTFETVVFVQGVPYLNGEPLVDPAVIGLR
>Mature_233_residues
MRFLVVEYLPACEVSRMSCFRNLMVFLLALTPVPSLADGHRIVLSEDFGLSAVCWESPYEHGWEDFSDHSTVAQARYDLW
VLDPPPPPAVRFYEEPIQFRLTVGGWPCYYEYGNHRYRGAGTLLTSTVPTRYIEVDGRNFPYTVDPNIIVPIIRLLVSQC
EQSYPQPWPFTHLLPIGRDCEREVSDILLVETTAVQIYLDPNAPDTFETVVFVQGVPYLNGEPLVDPAVIGLR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26527; Mature: 26527

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFLVVEYLPACEVSRMSCFRNLMVFLLALTPVPSLADGHRIVLSEDFGLSAVCWESPYE
CEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCEEEEECCCHH
HGWEDFSDHSTVAQARYDLWVLDPPPPPAVRFYEEPIQFRLTVGGWPCYYEYGNHRYRGA
CCCCCCCCCHHHHHEEEEEEEECCCCCCCHHEECCCEEEEEEECCCEEEEECCCEEECCC
GTLLTSTVPTRYIEVDGRNFPYTVDPNIIVPIIRLLVSQCEQSYPQPWPFTHLLPIGRDC
CEEEECCCCEEEEEECCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCH
EREVSDILLVETTAVQIYLDPNAPDTFETVVFVQGVPYLNGEPLVDPAVIGLR
HHHHHCEEEEEEEEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCEEECCC
>Mature Secondary Structure
MRFLVVEYLPACEVSRMSCFRNLMVFLLALTPVPSLADGHRIVLSEDFGLSAVCWESPYE
CEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCEEEEECCCHH
HGWEDFSDHSTVAQARYDLWVLDPPPPPAVRFYEEPIQFRLTVGGWPCYYEYGNHRYRGA
CCCCCCCCCHHHHHEEEEEEEECCCCCCCHHEECCCEEEEEEECCCEEEEECCCEEECCC
GTLLTSTVPTRYIEVDGRNFPYTVDPNIIVPIIRLLVSQCEQSYPQPWPFTHLLPIGRDC
CEEEECCCCEEEEEECCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCH
EREVSDILLVETTAVQIYLDPNAPDTFETVVFVQGVPYLNGEPLVDPAVIGLR
HHHHHCEEEEEEEEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA