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The map label for this gene is ycaK [C]

Identifier: 89053968

GI number: 89053968

Start: 1446621

End: 1447250

Strand: Direct

Name: ycaK [C]

Synonym: Jann_1477

Alternate gene names: 89053968

Gene position: 1446621-1447250 (Clockwise)

Preceding gene: 89053967

Following gene: 89053969

Centisome position: 33.5

GC content: 60.48

Gene sequence:

>630_bases
ATGCGCGCCTTGGTGATTTACTGTCACCCGAAAGAGGGGTCGTTTGCCTCAGCGGTGCGCGACACCGTGATGACGCGTCT
GTCGGCATCGGGCGCGGAGACGCGCTTGCGCGACCTCTATGCCGAGGGGTTTCAGCCGGTGTTAACCACGCCGGAATGGA
CTGATTACCTTAACGCCCCCATGAACCGCGCCCCGGTGGAGGATCACGTCCAAGACCTGCAATGGTGCGACACGCTGATT
TTCATATACCCCACCTGGTGGTATGGGCTGCCCGCGATGTTGAAAGGGTGGCTGGATCGAGTGCTGTTGCCGGACGTCGC
CTTTTTGATGCCCAAAGCGGATGGGGAGACAATCCGCCCGGGCCTTCATCATATTGATAAGATGGGTGTTTTCACCACGT
GCGGTGCGTCTTGGTGGCTGACCCGCATGGTCGGTGCGCCGGGGCGACGCACTCTGTTGCGAGGCGTTGGCTTCCTTCTG
AAACCGGGCGCGCGGAAGGTGTTTGCGGCCACCTATCTCATGGACAGTGCCACGCCCGACGCGCTTCGAAAACACCTCGC
GACCGTCGCGACAAAGACGGATAAACTGGTTAATGCCGTGCCAGCGAAACAGGAGGTTCCCGCCCAATGA

Upstream 100 bases:

>100_bases
CAAAATTCGCTATATTGCCCAATATGATATGAACAACATCACGCCTGCCGGATGCGATGCATTTCTGGCCCGCGTCACCC
GTGAAATGGAGGCATTTTAG

Downstream 100 bases:

>100_bases
GCCGTTATTGGATCGACTATCCCGCCCCTGATTTGCAGATTGACCCGGACCGGACCATCGCGATTTTGCCGGTTGCAGCT
GTGGAACAACACGGGCCCCA

Product: NAD(P)H dehydrogenase (quinone)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MRALVIYCHPKEGSFASAVRDTVMTRLSASGAETRLRDLYAEGFQPVLTTPEWTDYLNAPMNRAPVEDHVQDLQWCDTLI
FIYPTWWYGLPAMLKGWLDRVLLPDVAFLMPKADGETIRPGLHHIDKMGVFTTCGASWWLTRMVGAPGRRTLLRGVGFLL
KPGARKVFAATYLMDSATPDALRKHLATVATKTDKLVNAVPAKQEVPAQ

Sequences:

>Translated_209_residues
MRALVIYCHPKEGSFASAVRDTVMTRLSASGAETRLRDLYAEGFQPVLTTPEWTDYLNAPMNRAPVEDHVQDLQWCDTLI
FIYPTWWYGLPAMLKGWLDRVLLPDVAFLMPKADGETIRPGLHHIDKMGVFTTCGASWWLTRMVGAPGRRTLLRGVGFLL
KPGARKVFAATYLMDSATPDALRKHLATVATKTDKLVNAVPAKQEVPAQ
>Mature_209_residues
MRALVIYCHPKEGSFASAVRDTVMTRLSASGAETRLRDLYAEGFQPVLTTPEWTDYLNAPMNRAPVEDHVQDLQWCDTLI
FIYPTWWYGLPAMLKGWLDRVLLPDVAFLMPKADGETIRPGLHHIDKMGVFTTCGASWWLTRMVGAPGRRTLLRGVGFLL
KPGARKVFAATYLMDSATPDALRKHLATVATKTDKLVNAVPAKQEVPAQ

Specific function: Unknown

COG id: COG2249

COG function: function code R; Putative NADPH-quinone reductase (modulator of drug activity B)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NAD(P)H dehydrogenase (quinone) family [H]

Homologues:

Organism=Homo sapiens, GI156564357, Length=126, Percent_Identity=29.3650793650794, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI70995396, Length=141, Percent_Identity=30.4964539007092, Blast_Score=64, Evalue=8e-11,
Organism=Homo sapiens, GI4505415, Length=123, Percent_Identity=31.7073170731707, Blast_Score=64, Evalue=1e-10,
Organism=Escherichia coli, GI1787129, Length=108, Percent_Identity=32.4074074074074, Blast_Score=70, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003680 [H]

Pfam domain/function: PF02525 Flavodoxin_2 [H]

EC number: 1.6.99.- [C]

Molecular weight: Translated: 23327; Mature: 23327

Theoretical pI: Translated: 9.13; Mature: 9.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRALVIYCHPKEGSFASAVRDTVMTRLSASGAETRLRDLYAEGFQPVLTTPEWTDYLNAP
CCEEEEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHCCC
MNRAPVEDHVQDLQWCDTLIFIYPTWWYGLPAMLKGWLDRVLLPDVAFLMPKADGETIRP
CCCCCHHHHHHHHHHHHHHHHHHCHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH
GLHHIDKMGVFTTCGASWWLTRMVGAPGRRTLLRGVGFLLKPGARKVFAATYLMDSATPD
HHHHHHHHCHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHH
ALRKHLATVATKTDKLVNAVPAKQEVPAQ
HHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MRALVIYCHPKEGSFASAVRDTVMTRLSASGAETRLRDLYAEGFQPVLTTPEWTDYLNAP
CCEEEEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHCCC
MNRAPVEDHVQDLQWCDTLIFIYPTWWYGLPAMLKGWLDRVLLPDVAFLMPKADGETIRP
CCCCCHHHHHHHHHHHHHHHHHHCHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH
GLHHIDKMGVFTTCGASWWLTRMVGAPGRRTLLRGVGFLLKPGARKVFAATYLMDSATPD
HHHHHHHHCHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHH
ALRKHLATVATKTDKLVNAVPAKQEVPAQ
HHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]