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The map label for this gene is iolB [H]

Identifier: 89053909

GI number: 89053909

Start: 1386565

End: 1387404

Strand: Reverse

Name: iolB [H]

Synonym: Jann_1418

Alternate gene names: 89053909

Gene position: 1387404-1386565 (Counterclockwise)

Preceding gene: 89053910

Following gene: 89053908

Centisome position: 32.13

GC content: 54.64

Gene sequence:

>840_bases
ATGCACATCCCCCCCTTTGACAACCAAAACCAGGCCATCGTGGGTGAAGGCGACGCGCATGTTCCGCTAACGTATTTCAA
TATCGTAAAATTGAAAGAAGGCGAGGCCTACGACTACCGCTTAAAGGGCTACGAGACCTGCATCGTTCCGGCGACGGGCA
CCGTCGATGTGGAGGTTGGCGGAGAGGTCTTCGCCGACATCGGAAACCGTTGCGTAGATGTGTGGGATGGCGACCCGGAG
GGCGTCTACGTGCCAACCAATGTCGGAGCGCACATTACGGCGCGCACCGATGCCGAAATCTTCGTGGCTGGGGCGCAGTT
TACAGAAACTCTTACGCCCTTCGCCGTCCGCGCGGGCGAGTTGGATCTTGTGCAATATGGATCCGACGAAACAAAAACAC
ATCGTAAAATCAAACACATACTTGGCGCGGGCCATCATGATCGGGTCGGGCGTTTGTTGGTGAGTGAGCTGTTTACAGTC
GGAGCCGGAGGATGGTCCGGCTTCCCGTCTCACAAGCATGACACAGATCGTTTGCCGGACGAGACGCGCCATGACGAATG
CTATAATTTCCGGTTCAAGCCCGATTATGGGTCAGGTCTGCAGATGCTCCAACGCGAGGACAATGAGCCTGGCGATGCGT
ATCATATCATGAACGGCTCTACAGTTCTGATCGACAAGGGGTACCATCCGTGCTGCGCACTGCCCGGGTACGAAATGTAT
TACTTTACGATCCTCGGAGGGTTGTCTCAACGCAGCTTGAAGCAGTACTTTCAGCCGACCCATTCTGAACAATTACACAC
GATTCCCGGCATCATGGACATGGTGGCGAAGTTCAAATGA

Upstream 100 bases:

>100_bases
CGCCCCAGCGATGCCCACGCGGTCTGAGTTGGACGCGTTTTTGAACGATCACCCAGGGCCAACGGCCCCCAGCGACCCGG
CCTGAAAGGACGCGTTAACC

Downstream 100 bases:

>100_bases
CCCTCGCGACGCTTGCTGACGTTTTGCGCCCTGCCATGGCAGGTGGCTACGCTGTTCCCGGCCTCGTTTGTCTGGGATGG
GAGGACATGCGGGCGTTTAC

Product: myo-inositol catabolism IolB protein

Products: NA

Alternate protein names: 5DG isomerase [H]

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MHIPPFDNQNQAIVGEGDAHVPLTYFNIVKLKEGEAYDYRLKGYETCIVPATGTVDVEVGGEVFADIGNRCVDVWDGDPE
GVYVPTNVGAHITARTDAEIFVAGAQFTETLTPFAVRAGELDLVQYGSDETKTHRKIKHILGAGHHDRVGRLLVSELFTV
GAGGWSGFPSHKHDTDRLPDETRHDECYNFRFKPDYGSGLQMLQREDNEPGDAYHIMNGSTVLIDKGYHPCCALPGYEMY
YFTILGGLSQRSLKQYFQPTHSEQLHTIPGIMDMVAKFK

Sequences:

>Translated_279_residues
MHIPPFDNQNQAIVGEGDAHVPLTYFNIVKLKEGEAYDYRLKGYETCIVPATGTVDVEVGGEVFADIGNRCVDVWDGDPE
GVYVPTNVGAHITARTDAEIFVAGAQFTETLTPFAVRAGELDLVQYGSDETKTHRKIKHILGAGHHDRVGRLLVSELFTV
GAGGWSGFPSHKHDTDRLPDETRHDECYNFRFKPDYGSGLQMLQREDNEPGDAYHIMNGSTVLIDKGYHPCCALPGYEMY
YFTILGGLSQRSLKQYFQPTHSEQLHTIPGIMDMVAKFK
>Mature_279_residues
MHIPPFDNQNQAIVGEGDAHVPLTYFNIVKLKEGEAYDYRLKGYETCIVPATGTVDVEVGGEVFADIGNRCVDVWDGDPE
GVYVPTNVGAHITARTDAEIFVAGAQFTETLTPFAVRAGELDLVQYGSDETKTHRKIKHILGAGHHDRVGRLLVSELFTV
GAGGWSGFPSHKHDTDRLPDETRHDECYNFRFKPDYGSGLQMLQREDNEPGDAYHIMNGSTVLIDKGYHPCCALPGYEMY
YFTILGGLSQRSLKQYFQPTHSEQLHTIPGIMDMVAKFK

Specific function: Involved in the isomerization of 5-deoxy-glucuronate (5DG) to 5-dehydro-2-deoxy-D-gluconate (DKG or 2-deoxy-5-keto-D- gluconate) [H]

COG id: COG3718

COG function: function code G; Uncharacterized enzyme involved in inositol metabolism

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the isomerase iolB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011051
- InterPro:   IPR021120
- InterPro:   IPR014710 [H]

Pfam domain/function: PF04962 KduI [H]

EC number: NA

Molecular weight: Translated: 31056; Mature: 31056

Theoretical pI: Translated: 5.31; Mature: 5.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHIPPFDNQNQAIVGEGDAHVPLTYFNIVKLKEGEAYDYRLKGYETCIVPATGTVDVEVG
CCCCCCCCCCCEEEECCCCCCEEEEEEEEEEECCCCEEEEECCCEEEEECCCCEEEEEEC
GEVFADIGNRCVDVWDGDPEGVYVPTNVGAHITARTDAEIFVAGAQFTETLTPFAVRAGE
CHHHHHCCCEEEEECCCCCCCEEEECCCCCEEEEECCCEEEEECCHHHHHCCCHHEECCC
LDLVQYGSDETKTHRKIKHILGAGHHDRVGRLLVSELFTVGAGGWSGFPSHKHDTDRLPD
EEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
ETRHDECYNFRFKPDYGSGLQMLQREDNEPGDAYHIMNGSTVLIDKGYHPCCALPGYEMY
CCCCCCCEEEEECCCCCCHHHHHHHCCCCCCCEEEEECCCEEEEECCCCCEECCCCCCEE
YFTILGGLSQRSLKQYFQPTHSEQLHTIPGIMDMVAKFK
EEEECCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MHIPPFDNQNQAIVGEGDAHVPLTYFNIVKLKEGEAYDYRLKGYETCIVPATGTVDVEVG
CCCCCCCCCCCEEEECCCCCCEEEEEEEEEEECCCCEEEEECCCEEEEECCCCEEEEEEC
GEVFADIGNRCVDVWDGDPEGVYVPTNVGAHITARTDAEIFVAGAQFTETLTPFAVRAGE
CHHHHHCCCEEEEECCCCCCCEEEECCCCCEEEEECCCEEEEECCHHHHHCCCHHEECCC
LDLVQYGSDETKTHRKIKHILGAGHHDRVGRLLVSELFTVGAGGWSGFPSHKHDTDRLPD
EEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
ETRHDECYNFRFKPDYGSGLQMLQREDNEPGDAYHIMNGSTVLIDKGYHPCCALPGYEMY
CCCCCCCEEEEECCCCCCHHHHHHHCCCCCCCEEEEECCCEEEEECCCCCEECCCCCCEE
YFTILGGLSQRSLKQYFQPTHSEQLHTIPGIMDMVAKFK
EEEECCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA