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The map label for this gene is yurN [H]

Identifier: 89053846

GI number: 89053846

Start: 1319090

End: 1320004

Strand: Reverse

Name: yurN [H]

Synonym: Jann_1355

Alternate gene names: 89053846

Gene position: 1320004-1319090 (Counterclockwise)

Preceding gene: 89053847

Following gene: 89053845

Centisome position: 30.57

GC content: 58.58

Gene sequence:

>915_bases
ATGCGCCAATCGCGTATCAAGTGGCATATCATCGTGTTCCTGGCACCGGCTGTGCTCGTCTACACCGCGATCATGATTGT
CCCCCTGTTCAACACCCTGCGCCTGTCGCTGTTCACGGAGGTGGATCAGGAACGGATCTTCGTGGGCCTCGATAACTTCC
GCACGCTCTTCGGGGACCCGCGTTGGTCCGAGAGCTTCTGGAACGCGCTTGGCAACAATTTCTGGTTTTTCTTCGTCCAC
ATGCTGGTGCAAAATCCCATCGGCATTCTTCTGGCCGCGCTTCTTAGCAACCCGCGCCTGCGGTTCAGCGCCTTCTACCG
CACCGCGATTTTCGTCCCCACCATCCTGTCCTTCGTGATCGTGGGCTTTGCGTGGAAGCTGATCCTGTCGCCGATCTGGG
GCATCGCGCCCGAAATGCTGGACGCCGTGGGCCTTGGCTTCCTCTATCAACCCTGGCTGGGGCTGGAGGAGACGTCTCTG
ACGACCCTCGCCCTGATCTCCGTCTGGCAGTTCGTCGGCATCCCGATGATGCTGATCTACGCCGCGCTCCTGTCGATCCC
CGATGAGATCCTTGAGGCAGGCGAATGTGACGGGATCACCGGATTTTCCGCCTTCTGGAAGATCAAACTGCCGCTGATCC
TCCCGTCCATCGGCATCATCTCCATCCTGACGTTTGTGGGTAACTTCAATGCCTTCGACCTGATCTATGCCGCCCAGGGC
GCGCTTGCCGGGCCGAACTATGCCACCGATATCCTTGGCACATTCATGTACCGCACCTTCTTCGGCTTCCAGTTGCAATT
GGGCGACCCGCATATGGGCTCTGCCATCGCCAGCGCCATGTTCGCGATCATCCTTGTGGGTGTCTGCTTCTACCTCTTCG
CCATCCAATCCCGGATGCGCCGGTATCAGTTTTAA

Upstream 100 bases:

>100_bases
ACGAACCGCAGCAGTAACCTCCCAGTTTGCTGCATTTGATCCGGGCGGCAGGTCTCGCCCGGATCACCCCAACCCTCACC
CGATTTTAAAGGAGGCTGTC

Downstream 100 bases:

>100_bases
GGAGTGGGACGATGAACAAAGCACGCCGCAATCCCGTCAACCTCTTCGCCGCCCATGGCATCCTGATCTTCTACACGGTC
ATCGCCCTGTTTCCGGTGTT

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MRQSRIKWHIIVFLAPAVLVYTAIMIVPLFNTLRLSLFTEVDQERIFVGLDNFRTLFGDPRWSESFWNALGNNFWFFFVH
MLVQNPIGILLAALLSNPRLRFSAFYRTAIFVPTILSFVIVGFAWKLILSPIWGIAPEMLDAVGLGFLYQPWLGLEETSL
TTLALISVWQFVGIPMMLIYAALLSIPDEILEAGECDGITGFSAFWKIKLPLILPSIGIISILTFVGNFNAFDLIYAAQG
ALAGPNYATDILGTFMYRTFFGFQLQLGDPHMGSAIASAMFAIILVGVCFYLFAIQSRMRRYQF

Sequences:

>Translated_304_residues
MRQSRIKWHIIVFLAPAVLVYTAIMIVPLFNTLRLSLFTEVDQERIFVGLDNFRTLFGDPRWSESFWNALGNNFWFFFVH
MLVQNPIGILLAALLSNPRLRFSAFYRTAIFVPTILSFVIVGFAWKLILSPIWGIAPEMLDAVGLGFLYQPWLGLEETSL
TTLALISVWQFVGIPMMLIYAALLSIPDEILEAGECDGITGFSAFWKIKLPLILPSIGIISILTFVGNFNAFDLIYAAQG
ALAGPNYATDILGTFMYRTFFGFQLQLGDPHMGSAIASAMFAIILVGVCFYLFAIQSRMRRYQF
>Mature_304_residues
MRQSRIKWHIIVFLAPAVLVYTAIMIVPLFNTLRLSLFTEVDQERIFVGLDNFRTLFGDPRWSESFWNALGNNFWFFFVH
MLVQNPIGILLAALLSNPRLRFSAFYRTAIFVPTILSFVIVGFAWKLILSPIWGIAPEMLDAVGLGFLYQPWLGLEETSL
TTLALISVWQFVGIPMMLIYAALLSIPDEILEAGECDGITGFSAFWKIKLPLILPSIGIISILTFVGNFNAFDLIYAAQG
ALAGPNYATDILGTFMYRTFFGFQLQLGDPHMGSAIASAMFAIILVGVCFYLFAIQSRMRRYQF

Specific function: Probably part of the binding-protein-dependent transport system yurMNO. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=304, Percent_Identity=29.6052631578947, Blast_Score=82, Evalue=4e-17,
Organism=Escherichia coli, GI1787570, Length=255, Percent_Identity=25.8823529411765, Blast_Score=73, Evalue=3e-14,
Organism=Escherichia coli, GI1790465, Length=264, Percent_Identity=28.030303030303, Blast_Score=69, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 34291; Mature: 34291

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQSRIKWHIIVFLAPAVLVYTAIMIVPLFNTLRLSLFTEVDQERIFVGLDNFRTLFGDP
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEEEEHHHHHHHHCCC
RWSESFWNALGNNFWFFFVHMLVQNPIGILLAALLSNPRLRFSAFYRTAIFVPTILSFVI
CCHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
VGFAWKLILSPIWGIAPEMLDAVGLGFLYQPWLGLEETSLTTLALISVWQFVGIPMMLIY
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AALLSIPDEILEAGECDGITGFSAFWKIKLPLILPSIGIISILTFVGNFNAFDLIYAAQG
HHHHHCCHHHHCCCCCCCCCCHHHHHEEEHHHHHCCHHHHHHHHHHCCCCHHHHHHHHCC
ALAGPNYATDILGTFMYRTFFGFQLQLGDPHMGSAIASAMFAIILVGVCFYLFAIQSRMR
CCCCCCHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RYQF
HCCC
>Mature Secondary Structure
MRQSRIKWHIIVFLAPAVLVYTAIMIVPLFNTLRLSLFTEVDQERIFVGLDNFRTLFGDP
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEEEEHHHHHHHHCCC
RWSESFWNALGNNFWFFFVHMLVQNPIGILLAALLSNPRLRFSAFYRTAIFVPTILSFVI
CCHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
VGFAWKLILSPIWGIAPEMLDAVGLGFLYQPWLGLEETSLTTLALISVWQFVGIPMMLIY
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AALLSIPDEILEAGECDGITGFSAFWKIKLPLILPSIGIISILTFVGNFNAFDLIYAAQG
HHHHHCCHHHHCCCCCCCCCCHHHHHEEEHHHHHCCHHHHHHHHHHCCCCHHHHHHHHCC
ALAGPNYATDILGTFMYRTFFGFQLQLGDPHMGSAIASAMFAIILVGVCFYLFAIQSRMR
CCCCCCHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RYQF
HCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]