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The map label for this gene is ycjP [C]

Identifier: 89053845

GI number: 89053845

Start: 1318239

End: 1319078

Strand: Reverse

Name: ycjP [C]

Synonym: Jann_1354

Alternate gene names: 89053845

Gene position: 1319078-1318239 (Counterclockwise)

Preceding gene: 89053846

Following gene: 89053844

Centisome position: 30.55

GC content: 57.74

Gene sequence:

>840_bases
ATGAACAAAGCACGCCGCAATCCCGTCAACCTCTTCGCCGCCCATGGCATCCTGATCTTCTACACGGTCATCGCCCTGTT
TCCGGTGTTTGTGATCCTCATCAATAGCTTCAAGGAGCGGCGGTCGATCTTTCGTGAGCCTCTGGCCCTCCCGGATGGGG
AAAGTTTCTCAACCGTCGGATACGAGACGGTCTTCAACCAAGGCGATTTCTTCCTCTACTTTCAGAACTCGCTGATCGTC
ACCGTCGCCTCCCTGTTCCTTGTCCTGCTGTTCGGGGCCATGGCCGCCTTCGCGCTGACCGAATACAAGTTCAAGGGCAA
CACGCTGATGGGCCTCTATCTGGCGCTCGGCATCATGATCCCGATCCGCATCGGCACCGTCGCAATTCTTGAGATGATGG
TATCCACCGGTCTGGTGAACACGCTCTGGGCGCTGATCCTGGTCTACACCGCGCAAGGCCTGCCGCTGGCCGTCTTCATT
CTGTCGGAATTCATGCGACAGGTGAGTGATGACCTGAAAAACGCGGGCCGCATTGATGGGTTGAATGAATACACAATCTT
CTTCCGCCTTGTTTTGCCGCTGGTCCGTCCGGCCATGGCAACCGTCGCCGTGTTCAACATGATCCCGATCTGGAATGACC
TGTGGTTCCCCCTGATCCTGGCCCCGGCGGAGGAAACCAAGACCCTCACGCTTGGCTCTCAGGTTTTCATCGGCCAGTTC
GTGACCGACTGGAACGCGGTGCTGTCCGCGCTGTCGATGGCGATCCTGCCGGTTATGGTCCTCTACGTCATCTTCTCACG
CCAACTGATCCGCGGCATCACCTCCGGCGCCGTCAAATGA

Upstream 100 bases:

>100_bases
TCGCCAGCGCCATGTTCGCGATCATCCTTGTGGGTGTCTGCTTCTACCTCTTCGCCATCCAATCCCGGATGCGCCGGTAT
CAGTTTTAAGGAGTGGGACG

Downstream 100 bases:

>100_bases
TCCCTGTCCTCAACCTTGGGAGTGTCCCGACATGACTGCTTTGACCCTCAAAAACGTCACCAAATCCTTCGGCAAGGTGC
AGGTGCTGCACGATATCAAT

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MNKARRNPVNLFAAHGILIFYTVIALFPVFVILINSFKERRSIFREPLALPDGESFSTVGYETVFNQGDFFLYFQNSLIV
TVASLFLVLLFGAMAAFALTEYKFKGNTLMGLYLALGIMIPIRIGTVAILEMMVSTGLVNTLWALILVYTAQGLPLAVFI
LSEFMRQVSDDLKNAGRIDGLNEYTIFFRLVLPLVRPAMATVAVFNMIPIWNDLWFPLILAPAEETKTLTLGSQVFIGQF
VTDWNAVLSALSMAILPVMVLYVIFSRQLIRGITSGAVK

Sequences:

>Translated_279_residues
MNKARRNPVNLFAAHGILIFYTVIALFPVFVILINSFKERRSIFREPLALPDGESFSTVGYETVFNQGDFFLYFQNSLIV
TVASLFLVLLFGAMAAFALTEYKFKGNTLMGLYLALGIMIPIRIGTVAILEMMVSTGLVNTLWALILVYTAQGLPLAVFI
LSEFMRQVSDDLKNAGRIDGLNEYTIFFRLVLPLVRPAMATVAVFNMIPIWNDLWFPLILAPAEETKTLTLGSQVFIGQF
VTDWNAVLSALSMAILPVMVLYVIFSRQLIRGITSGAVK
>Mature_279_residues
MNKARRNPVNLFAAHGILIFYTVIALFPVFVILINSFKERRSIFREPLALPDGESFSTVGYETVFNQGDFFLYFQNSLIV
TVASLFLVLLFGAMAAFALTEYKFKGNTLMGLYLALGIMIPIRIGTVAILEMMVSTGLVNTLWALILVYTAQGLPLAVFI
LSEFMRQVSDDLKNAGRIDGLNEYTIFFRLVLPLVRPAMATVAVFNMIPIWNDLWFPLILAPAEETKTLTLGSQVFIGQF
VTDWNAVLSALSMAILPVMVLYVIFSRQLIRGITSGAVK

Specific function: Probably Part Of The Binding-Protein-Dependent Transport System Ycjnop. Probably Responsible For The Translocation Of The Substrate Across The Membrane. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=270, Percent_Identity=30.7407407407407, Blast_Score=113, Evalue=1e-26,
Organism=Escherichia coli, GI1789860, Length=270, Percent_Identity=22.962962962963, Blast_Score=87, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31100; Mature: 31100

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKARRNPVNLFAAHGILIFYTVIALFPVFVILINSFKERRSIFREPLALPDGESFSTVG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH
YETVFNQGDFFLYFQNSLIVTVASLFLVLLFGAMAAFALTEYKFKGNTLMGLYLALGIMI
HHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
PIRIGTVAILEMMVSTGLVNTLWALILVYTAQGLPLAVFILSEFMRQVSDDLKNAGRIDG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
LNEYTIFFRLVLPLVRPAMATVAVFNMIPIWNDLWFPLILAPAEETKTLTLGSQVFIGQF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCEEEECCHHHHHHH
VTDWNAVLSALSMAILPVMVLYVIFSRQLIRGITSGAVK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNKARRNPVNLFAAHGILIFYTVIALFPVFVILINSFKERRSIFREPLALPDGESFSTVG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH
YETVFNQGDFFLYFQNSLIVTVASLFLVLLFGAMAAFALTEYKFKGNTLMGLYLALGIMI
HHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
PIRIGTVAILEMMVSTGLVNTLWALILVYTAQGLPLAVFILSEFMRQVSDDLKNAGRIDG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
LNEYTIFFRLVLPLVRPAMATVAVFNMIPIWNDLWFPLILAPAEETKTLTLGSQVFIGQF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCEEEECCHHHHHHH
VTDWNAVLSALSMAILPVMVLYVIFSRQLIRGITSGAVK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8920183 [H]