Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89053789

Identifier: 89053789

GI number: 89053789

Start: 1256864

End: 1257463

Strand: Reverse

Name: 89053789

Synonym: Jann_1298

Alternate gene names: NA

Gene position: 1257463-1256864 (Counterclockwise)

Preceding gene: 89053790

Following gene: 89053788

Centisome position: 29.12

GC content: 58.5

Gene sequence:

>600_bases
ATGACCAAAGAAAAGTTTGACGTTTACACCCATGTTACCAATCAGATTGTTGCTCAGATCGAGGCGGGAACGCCCCCGTG
GCGCAAGCCGTGGACCGGTGGCGGGGTATCGGTCAGCCTGCCCGAACGGCTCAACGGCGAGGCCTGTCGGGGTATAAATA
TTCTGATGCTTTGGGCAACCGCGATGGCCAAGGATTACAGTTCAGCACGTTGGATGACATTCAATCAAGCCAAGCTGCTT
GGGGGGCATGTCCGCAAGGGCGAGAAATCCGCAACCGTTGTGAAATACGGCACCGTCGCGCGTGAGGACGAGAACGGCGA
CGAACGCCAGATTCGCTATGCCAAGGCCTACCGCGTGTTCAACGCAGATCAAATCGAAGACCTACCCGCTGAATTCTACA
TCCTGCCCGATCCGCCCCGTGATCTTGGCACCGTATCCGACCCCGCGTTGGAGGGTTTCTTTGCGGCGACGGGCGCGCAG
ATCGACGTAACCGAGGAGCCGCGCGCCTATTACACATCAAGACCGACCGCATCCACATGCCGCCGATTGGCACATTCCAC
AGGGCCGCAGGATATTACGGCACCTTGGCGCACGAGCTGA

Upstream 100 bases:

>100_bases
TTCGGAATGCATGGGCATTCCAAACAACAGAAGCAGGAAGGCCCGCCCATTGGCGGAAAGGGAAACAGACCCCGACCGCA
TCACGCGAGGAGGGTCACAA

Downstream 100 bases:

>100_bases
CCCACTGGACAAGTGCAACAAAGCGGCTGGACCGTCTGGGCCGGCTCAACGATCGCAAGGCCTATGCCCTCGAAGAACTG
GTGGCAGAAATCGGCAACTG

Product: antirestriction protein-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 198

Protein sequence:

>199_residues
MTKEKFDVYTHVTNQIVAQIEAGTPPWRKPWTGGGVSVSLPERLNGEACRGINILMLWATAMAKDYSSARWMTFNQAKLL
GGHVRKGEKSATVVKYGTVAREDENGDERQIRYAKAYRVFNADQIEDLPAEFYILPDPPRDLGTVSDPALEGFFAATGAQ
IDVTEEPRAYYTSRPTASTCRRLAHSTGPQDITAPWRTS

Sequences:

>Translated_199_residues
MTKEKFDVYTHVTNQIVAQIEAGTPPWRKPWTGGGVSVSLPERLNGEACRGINILMLWATAMAKDYSSARWMTFNQAKLL
GGHVRKGEKSATVVKYGTVAREDENGDERQIRYAKAYRVFNADQIEDLPAEFYILPDPPRDLGTVSDPALEGFFAATGAQ
IDVTEEPRAYYTSRPTASTCRRLAHSTGPQDITAPWRTS
>Mature_198_residues
TKEKFDVYTHVTNQIVAQIEAGTPPWRKPWTGGGVSVSLPERLNGEACRGINILMLWATAMAKDYSSARWMTFNQAKLLG
GHVRKGEKSATVVKYGTVAREDENGDERQIRYAKAYRVFNADQIEDLPAEFYILPDPPRDLGTVSDPALEGFFAATGAQI
DVTEEPRAYYTSRPTASTCRRLAHSTGPQDITAPWRTS

Specific function: Unknown

COG id: COG4227

COG function: function code L; Antirestriction protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017113
- InterPro:   IPR013610 [H]

Pfam domain/function: PF08401 DUF1738 [H]

EC number: NA

Molecular weight: Translated: 22128; Mature: 21997

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKEKFDVYTHVTNQIVAQIEAGTPPWRKPWTGGGVSVSLPERLNGEACRGINILMLWAT
CCCCHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCEEEECCHHCCCCCCCCCEEEEHHHH
AMAKDYSSARWMTFNQAKLLGGHVRKGEKSATVVKYGTVAREDENGDERQIRYAKAYRVF
HHHHCCCCCEEEEECHHHHHCCCCCCCCCCCEEEEECCEECCCCCCCHHHHHHHHHHHCC
NADQIEDLPAEFYILPDPPRDLGTVSDPALEGFFAATGAQIDVTEEPRAYYTSRPTASTC
CCCHHCCCCCEEEECCCCCCCCCCCCCHHHHHHEECCCCEEEECCCCCEEECCCCCHHHH
RRLAHSTGPQDITAPWRTS
HHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
TKEKFDVYTHVTNQIVAQIEAGTPPWRKPWTGGGVSVSLPERLNGEACRGINILMLWAT
CCCHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCEEEECCHHCCCCCCCCCEEEEHHHH
AMAKDYSSARWMTFNQAKLLGGHVRKGEKSATVVKYGTVAREDENGDERQIRYAKAYRVF
HHHHCCCCCEEEEECHHHHHCCCCCCCCCCCEEEEECCEECCCCCCCHHHHHHHHHHHCC
NADQIEDLPAEFYILPDPPRDLGTVSDPALEGFFAATGAQIDVTEEPRAYYTSRPTASTC
CCCHHCCCCCEEEECCCCCCCCCCCCCHHHHHHEECCCCEEEECCCCCEEECCCCCHHHH
RRLAHSTGPQDITAPWRTS
HHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]