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The map label for this gene is 89053742

Identifier: 89053742

GI number: 89053742

Start: 1206774

End: 1207421

Strand: Reverse

Name: 89053742

Synonym: Jann_1251

Alternate gene names: NA

Gene position: 1207421-1206774 (Counterclockwise)

Preceding gene: 89053743

Following gene: 89053741

Centisome position: 27.96

GC content: 65.74

Gene sequence:

>648_bases
ATGCCGCCAGGCCGGCGTTATCTGTCCATGACGACGTCTTCCAACAGCGGCACATCCGACGCATCGCCCCCGCCAGAGCC
GGTTCTGTCGTCCATCGCGGATGACATGGTCCGGGCCGCCGAGAAGGATGATGGCCGGGTGGAGGCGATGGTTGAGCAGG
CCGGGGCGGACGGATTGCTACCGATCATGACCTGCCTCGGTCTGATCCTTGTCTCGCCGCTTTCGGGAATTCCGCTGTTC
TCGACAAGTGTCGGCATGATGATCGCGCTCTGCGCCTCCCAGGCCGCGATGGGTCGTGACAAGCTCTGGCTGCCGGGATT
CTTGCGGCGACGTCAGGTGGATCCGGACCGGGTCGTCTCGGCCATGGGCTATGTCCGCAGGGCCGCGCGCTGGTTGGAGG
CGCGGGCCGCCCCGCGCCTGGAATGGCTCAGCGTCCCACCGGCCCGAACTGTTTTCCTCGGCCTTGCAGCGCTTTACGGG
CTGTCGATGCCCCTGATGGAAGTCGTGCCCTTCACATCCACGCTCTTTGGTGCGGCGGTGGTGATGGTCGGCCTGGGCCT
CATCCTGCGCGATGGGATCCTCCTGCTGTTGTCGACACTGCCCCCGGTGATCGCGGCACTCGTGCTGACCACGATTTTCG
CCGGCTGA

Upstream 100 bases:

>100_bases
GGCGGCGCAAACGCGCGGGTCGGCCCTGGCGGGCCTTGCAGGCGCGGCCGCTCCTCCCTGCGGTCCTCGCCGCGGTGGCG
CCTGCGGCGCGGAGGAACCA

Downstream 100 bases:

>100_bases
CCCCCCGCGCAGCCGCACATCACCGCCCCTCCTGTGCATTATATCGCCGGAACCTACGGCGCCGCGCCCGTCGCCGCCCG
CCACTGCGCCAATTTTACTC

Product: ABC transporter permease

Products: NA

Alternate protein names: ExoD Family Exopolysaccharide Synthesis Protein; ABC Transporter Permease; Exopolysaccharide Synthesis Protein

Number of amino acids: Translated: 215; Mature: 214

Protein sequence:

>215_residues
MPPGRRYLSMTTSSNSGTSDASPPPEPVLSSIADDMVRAAEKDDGRVEAMVEQAGADGLLPIMTCLGLILVSPLSGIPLF
STSVGMMIALCASQAAMGRDKLWLPGFLRRRQVDPDRVVSAMGYVRRAARWLEARAAPRLEWLSVPPARTVFLGLAALYG
LSMPLMEVVPFTSTLFGAAVVMVGLGLILRDGILLLLSTLPPVIAALVLTTIFAG

Sequences:

>Translated_215_residues
MPPGRRYLSMTTSSNSGTSDASPPPEPVLSSIADDMVRAAEKDDGRVEAMVEQAGADGLLPIMTCLGLILVSPLSGIPLF
STSVGMMIALCASQAAMGRDKLWLPGFLRRRQVDPDRVVSAMGYVRRAARWLEARAAPRLEWLSVPPARTVFLGLAALYG
LSMPLMEVVPFTSTLFGAAVVMVGLGLILRDGILLLLSTLPPVIAALVLTTIFAG
>Mature_214_residues
PPGRRYLSMTTSSNSGTSDASPPPEPVLSSIADDMVRAAEKDDGRVEAMVEQAGADGLLPIMTCLGLILVSPLSGIPLFS
TSVGMMIALCASQAAMGRDKLWLPGFLRRRQVDPDRVVSAMGYVRRAARWLEARAAPRLEWLSVPPARTVFLGLAALYGL
SMPLMEVVPFTSTLFGAAVVMVGLGLILRDGILLLLSTLPPVIAALVLTTIFAG

Specific function: Unknown

COG id: COG3932

COG function: function code R; Uncharacterized ABC-type transport system, permease components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22793; Mature: 22662

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPGRRYLSMTTSSNSGTSDASPPPEPVLSSIADDMVRAAEKDDGRVEAMVEQAGADGLL
CCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHH
PIMTCLGLILVSPLSGIPLFSTSVGMMIALCASQAAMGRDKLWLPGFLRRRQVDPDRVVS
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCHHHHHH
AMGYVRRAARWLEARAAPRLEWLSVPPARTVFLGLAALYGLSMPLMEVVPFTSTLFGAAV
HHHHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
VMVGLGLILRDGILLLLSTLPPVIAALVLTTIFAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PPGRRYLSMTTSSNSGTSDASPPPEPVLSSIADDMVRAAEKDDGRVEAMVEQAGADGLL
CCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHH
PIMTCLGLILVSPLSGIPLFSTSVGMMIALCASQAAMGRDKLWLPGFLRRRQVDPDRVVS
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCHHHHHH
AMGYVRRAARWLEARAAPRLEWLSVPPARTVFLGLAALYGLSMPLMEVVPFTSTLFGAAV
HHHHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
VMVGLGLILRDGILLLLSTLPPVIAALVLTTIFAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA