| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89053720
Identifier: 89053720
GI number: 89053720
Start: 1186030
End: 1186308
Strand: Reverse
Name: 89053720
Synonym: Jann_1229
Alternate gene names: NA
Gene position: 1186308-1186030 (Counterclockwise)
Preceding gene: 89053722
Following gene: 89053719
Centisome position: 27.47
GC content: 59.5
Gene sequence:
>279_bases ATGATGAAGACCTACTTCGTCACGAAACTGAAAGGATACGCCATGGCTCATCTGCCTCTGACCCGCCCTCACCAGGCCTC CCTCTCCACTGCCGTGGCGGCCTGCGCACCCAAGGTCCAACTGACACTATTGCAACGCATTGTCGGCGTCTGGCGTCAGC GCCAGCATCTGAGCCGTCTGGACGATCATATGCGCCGCGATATCGGCCTGAGCGACACGCAAATCAGCCACGAAGTTCAA CGGCCGATCTGGGACGTTCCGCAGACATGGCGGCATTAG
Upstream 100 bases:
>100_bases AGATCAAGGTTTCGCGCCATCCATCAAATCCCGTGATGATATTCTTCAAAAACATTCACTATCAAAATGTGACGAACCCG TCCATACATCACGTATCGGA
Downstream 100 bases:
>100_bases ACCGAACCCATAGCTAAAAACTATCGACCCTTGCAGCACCTGCGGGGGTCGTTTGCTTGAAAAACGAGGCAACCTACCCG ATATTCATACGCGAGAGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 92; Mature: 92
Protein sequence:
>92_residues MMKTYFVTKLKGYAMAHLPLTRPHQASLSTAVAACAPKVQLTLLQRIVGVWRQRQHLSRLDDHMRRDIGLSDTQISHEVQ RPIWDVPQTWRH
Sequences:
>Translated_92_residues MMKTYFVTKLKGYAMAHLPLTRPHQASLSTAVAACAPKVQLTLLQRIVGVWRQRQHLSRLDDHMRRDIGLSDTQISHEVQ RPIWDVPQTWRH >Mature_92_residues MMKTYFVTKLKGYAMAHLPLTRPHQASLSTAVAACAPKVQLTLLQRIVGVWRQRQHLSRLDDHMRRDIGLSDTQISHEVQ RPIWDVPQTWRH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10725; Mature: 10725
Theoretical pI: Translated: 11.16; Mature: 11.16
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKTYFVTKLKGYAMAHLPLTRPHQASLSTAVAACAPKVQLTLLQRIVGVWRQRQHLSRL CCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH DDHMRRDIGLSDTQISHEVQRPIWDVPQTWRH HHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MMKTYFVTKLKGYAMAHLPLTRPHQASLSTAVAACAPKVQLTLLQRIVGVWRQRQHLSRL CCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH DDHMRRDIGLSDTQISHEVQRPIWDVPQTWRH HHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA