| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89053650
Identifier: 89053650
GI number: 89053650
Start: 1122964
End: 1124466
Strand: Reverse
Name: 89053650
Synonym: Jann_1159
Alternate gene names: NA
Gene position: 1124466-1122964 (Counterclockwise)
Preceding gene: 89053651
Following gene: 89053648
Centisome position: 26.04
GC content: 55.89
Gene sequence:
>1503_bases ATGTTAGAAGCGTATGGCTCAGCCCTCACCTATCTGTTCACAACACCCTCGGCCGTCCTGCTCATTATTTTTTCTGTCAT CTGGGGCATCGCCTTTGGATCGGTTCCCGGTCTGACAGGTATCGTGGGCGTCGCACTTCTTATTCCTTTCACCTTCGTCT TCGACCCTACCTCAGGCCTTTTGTTGTTATCGGGGGTCTATGTCGGTTCAACGTTCGGCGGGTCAATATCCGCCATCCTG TTCAATACACCGGGCAGTCCAGAAGCGGCCTGTACCGCACTTGACGGCTATCCGATGGCGAGGAAGGGCGAAGCCGGCAA GGCACTTGGTATCGCGCTGGCCTCTTCGGCCATCGGCGGGATCTTCGGCACCATCGTGCTGATGCTGTTGGCGCCACCCA TGGCTCAATTCGCGCTCAATTTCGGGCCACCGGAATATTTTGCACTCGCCGTTCTGGGCATTACTGCCATCGCGGCGATT GGTGGCAGCTCGGTCCTCAAGGGGCTGGTCGCAGGTCTGCTGGGCCTTGGCATTGCAACTGTCGGCCTTGATCCTATCAC TGGAACAGAGCGTTACACATTCGGAAATCTCTCCTTGTTGACGGGCATCAGTTTCGTTCCCGCGATCATTGGTACCTTTG CATTGGCCGAAGTGCTGCAGCGCGCGGGCGAGAAAACGTCAACTGCGGATGTGCTGACCGACGTTTCGACCAAACTGCCC AGCATGAAAGAATTCTTGGCGACCAAGGTCACGCTTTTACGGTCCTCGGTCATTGGCTCCTTCATCGGGGCGTTGCCAGG CGTCGGGGCCACAACGGCAGCATTTATCAGCTATTCAGAAGCCGTGCGGTGGTCGAAGCGGCCAGAGGATTTCGGCACTG GTGTGGCCGAGGGCATTGCAGCCCCTGAGTCCGCGAACAATTCCGCCGTCGGTGGGTCCATGATCCCACTTCTTGCGCTT GGCATTCCAGGCAGTGCGACGACAGCGGTGATGCTGGGCGGATTGACGATCCACGGGATCATACCCGGACCATTGTTGAT GGAGACAAATACCCAACTCGTCTACACAGTCTTTATTGGCATGTTCATCGCCAATATTCTGATGCTGATTTTTGGCATCC GCATGGCACGCTACTTCGCGTTGATCCTCAAGGTTCCCTATGGATTGATCGGGCCCGCTATTGTGGTTTTGTGCATGACC GGCGTCTATGCGCTGAATTCAAATATCGTCGATGTCGGTGTGATGCTGGCCATGGGTGCATTCGGGTTCCTGTTGCGCAA GCTGCAGTACCCAATTGCGTCATTCGTGATCGGTCTTGTCCTTGGGCCAATCGCGGAACGCAGCCTGCGTCAGGGCCTGG TGATTGCGGATTACGACTTTCTGGAATTTGCCTCCCGGCCGATCACGGCGGTCCTTCTGCTGGCAAGCCTGATCTCGCTC ATCTACGGTTTTTATGGTCAGTGGAAACGCATTCAACAGAACAAAGACAAGACTGCTGCGTAA
Upstream 100 bases:
>100_bases GTTTTTTACGAGGGCGCTTGAGTTGCCTTTACCGCGTGGCATCGGGGTCTTTTACGACCTGAATGTTCTGATTTACTGAG CCCGGGAAGGATACCAAACC
Downstream 100 bases:
>100_bases CTCAGCCGCCCGTCTCCCGGGGGGGTACGCCAGGGCGGAAAAGACTCTCTGCGTAGGCGAATGAAAAAGGTGCATCGTCG ATCCAGAACCCGGCGTCGAA
Product: hypothetical protein
Products: NA
Alternate protein names: ORFZ2 [H]
Number of amino acids: Translated: 500; Mature: 500
Protein sequence:
>500_residues MLEAYGSALTYLFTTPSAVLLIIFSVIWGIAFGSVPGLTGIVGVALLIPFTFVFDPTSGLLLLSGVYVGSTFGGSISAIL FNTPGSPEAACTALDGYPMARKGEAGKALGIALASSAIGGIFGTIVLMLLAPPMAQFALNFGPPEYFALAVLGITAIAAI GGSSVLKGLVAGLLGLGIATVGLDPITGTERYTFGNLSLLTGISFVPAIIGTFALAEVLQRAGEKTSTADVLTDVSTKLP SMKEFLATKVTLLRSSVIGSFIGALPGVGATTAAFISYSEAVRWSKRPEDFGTGVAEGIAAPESANNSAVGGSMIPLLAL GIPGSATTAVMLGGLTIHGIIPGPLLMETNTQLVYTVFIGMFIANILMLIFGIRMARYFALILKVPYGLIGPAIVVLCMT GVYALNSNIVDVGVMLAMGAFGFLLRKLQYPIASFVIGLVLGPIAERSLRQGLVIADYDFLEFASRPITAVLLLASLISL IYGFYGQWKRIQQNKDKTAA
Sequences:
>Translated_500_residues MLEAYGSALTYLFTTPSAVLLIIFSVIWGIAFGSVPGLTGIVGVALLIPFTFVFDPTSGLLLLSGVYVGSTFGGSISAIL FNTPGSPEAACTALDGYPMARKGEAGKALGIALASSAIGGIFGTIVLMLLAPPMAQFALNFGPPEYFALAVLGITAIAAI GGSSVLKGLVAGLLGLGIATVGLDPITGTERYTFGNLSLLTGISFVPAIIGTFALAEVLQRAGEKTSTADVLTDVSTKLP SMKEFLATKVTLLRSSVIGSFIGALPGVGATTAAFISYSEAVRWSKRPEDFGTGVAEGIAAPESANNSAVGGSMIPLLAL GIPGSATTAVMLGGLTIHGIIPGPLLMETNTQLVYTVFIGMFIANILMLIFGIRMARYFALILKVPYGLIGPAIVVLCMT GVYALNSNIVDVGVMLAMGAFGFLLRKLQYPIASFVIGLVLGPIAERSLRQGLVIADYDFLEFASRPITAVLLLASLISL IYGFYGQWKRIQQNKDKTAA >Mature_500_residues MLEAYGSALTYLFTTPSAVLLIIFSVIWGIAFGSVPGLTGIVGVALLIPFTFVFDPTSGLLLLSGVYVGSTFGGSISAIL FNTPGSPEAACTALDGYPMARKGEAGKALGIALASSAIGGIFGTIVLMLLAPPMAQFALNFGPPEYFALAVLGITAIAAI GGSSVLKGLVAGLLGLGIATVGLDPITGTERYTFGNLSLLTGISFVPAIIGTFALAEVLQRAGEKTSTADVLTDVSTKLP SMKEFLATKVTLLRSSVIGSFIGALPGVGATTAAFISYSEAVRWSKRPEDFGTGVAEGIAAPESANNSAVGGSMIPLLAL GIPGSATTAVMLGGLTIHGIIPGPLLMETNTQLVYTVFIGMFIANILMLIFGIRMARYFALILKVPYGLIGPAIVVLCMT GVYALNSNIVDVGVMLAMGAFGFLLRKLQYPIASFVIGLVLGPIAERSLRQGLVIADYDFLEFASRPITAVLLLASLISL IYGFYGQWKRIQQNKDKTAA
Specific function: Unknown
COG id: COG3333
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002823 [H]
Pfam domain/function: PF01970 DUF112 [H]
EC number: NA
Molecular weight: Translated: 51777; Mature: 51777
Theoretical pI: Translated: 8.12; Mature: 8.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEAYGSALTYLFTTPSAVLLIIFSVIWGIAFGSVPGLTGIVGVALLIPFTFVFDPTSGL CCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEECCCCCH LLLSGVYVGSTFGGSISAILFNTPGSPEAACTALDGYPMARKGEAGKALGIALASSAIGG HHHHHHHHCCCCCCCEEEEEEECCCCCHHHHEECCCCCCCCCCCCCCHHHHHHHHHHHHH IFGTIVLMLLAPPMAQFALNFGPPEYFALAVLGITAIAAIGGSSVLKGLVAGLLGLGIAT HHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH VGLDPITGTERYTFGNLSLLTGISFVPAIIGTFALAEVLQRAGEKTSTADVLTDVSTKLP HCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCC SMKEFLATKVTLLRSSVIGSFIGALPGVGATTAAFISYSEAVRWSKRPEDFGTGVAEGIA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHCCCHHHHCC APESANNSAVGGSMIPLLALGIPGSATTAVMLGGLTIHGIIPGPLLMETNTQLVYTVFIG CCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHCCCEEEEEECCCCEEEECCCHHHHHHHHH MFIANILMLIFGIRMARYFALILKVPYGLIGPAIVVLCMTGVYALNSNIVDVGVMLAMGA HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH FGFLLRKLQYPIASFVIGLVLGPIAERSLRQGLVIADYDFLEFASRPITAVLLLASLISL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHCCHHHHHHHHHHHHHH IYGFYGQWKRIQQNKDKTAA HHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MLEAYGSALTYLFTTPSAVLLIIFSVIWGIAFGSVPGLTGIVGVALLIPFTFVFDPTSGL CCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEECCCCCH LLLSGVYVGSTFGGSISAILFNTPGSPEAACTALDGYPMARKGEAGKALGIALASSAIGG HHHHHHHHCCCCCCCEEEEEEECCCCCHHHHEECCCCCCCCCCCCCCHHHHHHHHHHHHH IFGTIVLMLLAPPMAQFALNFGPPEYFALAVLGITAIAAIGGSSVLKGLVAGLLGLGIAT HHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH VGLDPITGTERYTFGNLSLLTGISFVPAIIGTFALAEVLQRAGEKTSTADVLTDVSTKLP HCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCC SMKEFLATKVTLLRSSVIGSFIGALPGVGATTAAFISYSEAVRWSKRPEDFGTGVAEGIA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHCCCHHHHCC APESANNSAVGGSMIPLLALGIPGSATTAVMLGGLTIHGIIPGPLLMETNTQLVYTVFIG CCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHCCCEEEEEECCCCEEEECCCHHHHHHHHH MFIANILMLIFGIRMARYFALILKVPYGLIGPAIVVLCMTGVYALNSNIVDVGVMLAMGA HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH FGFLLRKLQYPIASFVIGLVLGPIAERSLRQGLVIADYDFLEFASRPITAVLLLASLISL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHCCHHHHHHHHHHHHHH IYGFYGQWKRIQQNKDKTAA HHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8672817 [H]