| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89053635
Identifier: 89053635
GI number: 89053635
Start: 1104986
End: 1105963
Strand: Reverse
Name: 89053635
Synonym: Jann_1144
Alternate gene names: NA
Gene position: 1105963-1104986 (Counterclockwise)
Preceding gene: 89053643
Following gene: 89053631
Centisome position: 25.61
GC content: 64.11
Gene sequence:
>978_bases TTGGCTCGGGCGTCATCTGATCCCGCAACAAAGGATGATTTCAATCTCATCGGATCAACTCCAAATCCACAGGGTCATGT CCTTCCAACGGGACCGCCCCCGTCCGCCGCGCCATCCGCCAGGCGGCATAGGCATCTTCCAGGGCCAGGCCCTCTGCGAC CATTCCGCAATACCGCGTGCGCTGGTCTTCATTCATATGGTTGCACGCGGCGTCATCGGCGTCCGCCCCGGCCCGCTCCA GCACATCCGCATACCCCTCCGCCTCCGCCGCATCGGGCAACCGCGCAACGATGGCGCCACGGGCCTCGCTCGCCCATGTT TCAAGGTCCCCCAGGCAGGCCAAAGCGGCGTCTTGCCCTTCGCAAATCTCCATCGCCAGACCCAGACATTCAAAGCTGGC CGTCTCCACAAGTCCCACCAGCGCATCCTGATCCTGCGGGGCCAGATCCTCCTGCAAAGAGTGTTCAAAGGCCTGATCAC CGCCCTGCAGACAGGTCTCTGCCGCGAAGATGGCCACGGCTGCCGGTCCATGGCCTTCGGCCAGCATCGGTGTCCCGATA CACCCGACCAAAAGGGCCAACCCTGCGTCCCGCCAGAGCATCTATTCCGCCTCCAGCCCACTTAATACATCCCAGTCCAG CGGCCCCAGGACGCCCATTAACCGCGCGACCTGCCAGGCCCAGACGGCCTCCTCAAATTTCAGCGCCGACTGGAAACTGT CGCACCACAGGCCGCGGCGGTAATCCCAGCCTGCGCAATCGTCGCCCGCATTGCTGCCATGGGCCAGCGCGTGGACCCTT GCGTATAAGGGCGCCAGCGGCCCCTCCACATCACCGGGGGCAGGCAGCATCGCCCGCATATCCGCAGCCCGCGCCTCGAA CCCTACCCGCAGACGGCGCTGACAGATCAGCGAATTGTCCGAGACCTGGCAGATCCCCATCGCCAGATACCCGCAATGCT GCACCCAATGGACATTGA
Upstream 100 bases:
>100_bases CCGCGAGACATGGCGCGCCCGCGACCGCTCACCCCCGCCCGCAGCCGCCAGATCCGCCGCCTCGCGGACCACGTCCAGCG CCTCCAGATGCGCCGCACGG
Downstream 100 bases:
>100_bases TCGCATCCAGCGCCCAACCGGCCCCGTACCCGGGGGTCAGCAAAGCCTCCTCGAACGCCTGCATCTGCTCGGGCAGACAT ACTTCAAACCGCGGCGTGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 325; Mature: 324
Protein sequence:
>325_residues MARASSDPATKDDFNLIGSTPNPQGHVLPTGPPPSAAPSARRHRHLPGPGPLRPFRNTACAGLHSYGCTRRHRRPPRPAP AHPHTPPPPPHRATAQRWRHGPRSPMFQGPPGRPKRRLALRKSPSPDPDIQSWPSPQVPPAHPDPAGPDPPAKSVQRPDH RPADRSLPRRWPRLPVHGLRPASVSRYTRPKGPTLRPARASIPPPAHLIHPSPAAPGRPLTARPARPRRPPQISAPTGNC RTTGRGGNPSLRNRRPHCCHGPARGPLRIRAPAAPPHHRGQAASPAYPQPAPRTLPADGADRSANCPRPGRSPSPDTRNA APNGH
Sequences:
>Translated_325_residues MARASSDPATKDDFNLIGSTPNPQGHVLPTGPPPSAAPSARRHRHLPGPGPLRPFRNTACAGLHSYGCTRRHRRPPRPAP AHPHTPPPPPHRATAQRWRHGPRSPMFQGPPGRPKRRLALRKSPSPDPDIQSWPSPQVPPAHPDPAGPDPPAKSVQRPDH RPADRSLPRRWPRLPVHGLRPASVSRYTRPKGPTLRPARASIPPPAHLIHPSPAAPGRPLTARPARPRRPPQISAPTGNC RTTGRGGNPSLRNRRPHCCHGPARGPLRIRAPAAPPHHRGQAASPAYPQPAPRTLPADGADRSANCPRPGRSPSPDTRNA APNGH >Mature_324_residues ARASSDPATKDDFNLIGSTPNPQGHVLPTGPPPSAAPSARRHRHLPGPGPLRPFRNTACAGLHSYGCTRRHRRPPRPAPA HPHTPPPPPHRATAQRWRHGPRSPMFQGPPGRPKRRLALRKSPSPDPDIQSWPSPQVPPAHPDPAGPDPPAKSVQRPDHR PADRSLPRRWPRLPVHGLRPASVSRYTRPKGPTLRPARASIPPPAHLIHPSPAAPGRPLTARPARPRRPPQISAPTGNCR TTGRGGNPSLRNRRPHCCHGPARGPLRIRAPAAPPHHRGQAASPAYPQPAPRTLPADGADRSANCPRPGRSPSPDTRNAA PNGH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34974; Mature: 34843
Theoretical pI: Translated: 12.59; Mature: 12.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARASSDPATKDDFNLIGSTPNPQGHVLPTGPPPSAAPSARRHRHLPGPGPLRPFRNTAC CCCCCCCCCCCCCCEEECCCCCCCCCEECCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHH AGLHSYGCTRRHRRPPRPAPAHPHTPPPPPHRATAQRWRHGPRSPMFQGPPGRPKRRLAL HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHC RKSPSPDPDIQSWPSPQVPPAHPDPAGPDPPAKSVQRPDHRPADRSLPRRWPRLPVHGLR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHCCCCCCCCCC PASVSRYTRPKGPTLRPARASIPPPAHLIHPSPAAPGRPLTARPARPRRPPQISAPTGNC CCHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC RTTGRGGNPSLRNRRPHCCHGPARGPLRIRAPAAPPHHRGQAASPAYPQPAPRTLPADGA CCCCCCCCCHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DRSANCPRPGRSPSPDTRNAAPNGH CCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure ARASSDPATKDDFNLIGSTPNPQGHVLPTGPPPSAAPSARRHRHLPGPGPLRPFRNTAC CCCCCCCCCCCCCEEECCCCCCCCCEECCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHH AGLHSYGCTRRHRRPPRPAPAHPHTPPPPPHRATAQRWRHGPRSPMFQGPPGRPKRRLAL HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHC RKSPSPDPDIQSWPSPQVPPAHPDPAGPDPPAKSVQRPDHRPADRSLPRRWPRLPVHGLR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHCCCCCCCCCC PASVSRYTRPKGPTLRPARASIPPPAHLIHPSPAAPGRPLTARPARPRRPPQISAPTGNC CCHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC RTTGRGGNPSLRNRRPHCCHGPARGPLRIRAPAAPPHHRGQAASPAYPQPAPRTLPADGA CCCCCCCCCHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DRSANCPRPGRSPSPDTRNAAPNGH CCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA