Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89053626

Identifier: 89053626

GI number: 89053626

Start: 1097016

End: 1097810

Strand: Reverse

Name: 89053626

Synonym: Jann_1135

Alternate gene names: NA

Gene position: 1097810-1097016 (Counterclockwise)

Preceding gene: 89053627

Following gene: 89053625

Centisome position: 25.42

GC content: 69.06

Gene sequence:

>795_bases
ATGCTCGCCACCCTGCCCATGTACCTGCGCGATGAGACACGGGCCGCCCATGATGCGCTCTGGTCGCTGACCCGGGACGC
GCTGCGTGACGCCGGATATCGAGACCAGGACGGCCATCCCGCCCCGAATGCGCTGGACCATGCCACGCCGCACACCGCCA
CCTGGACCCGGCCCGACCTGTTGCTGGGTCAGGTCTGCAACCTGCCCTACCGCACCCATGTCCACGCCGTGACCGCCCGT
GTCGGCACCTGTGACTATGGCCTGCCGGACACGCCACCGGGTCACTATTTTTCGTACTTTGTCATCCGTAAGGATGACCC
CCGCGACACGCCCGCCGCCTTCGCCACGGCGCGCCTTGCCGTTAACGAGCCCGACAGCCACTCCGGCTGGGGGGCGGCCT
GGACCTACGCCCGCCAAAATGGTTTCACCTTCACCCGCGCGGTCCTTACCGGGTCCCACAGCGCCTCCGCCCGCGCATTG
GCCGATGGGCGCGCGGACATCGCCTGCATTGACGCGATCAGCTGGCAGATGATCCGGCGCTATGACACCAGCGCGCGCCA
CCTGCGCCTGATCGCCCGCACGGACACCTCTCCGGGCCAGACCCTGATCACGGCGCGCCGCAACGATCCCGCCCCGATCC
GCGCCGCCGTCACCCAGGCCCTCACCGCCCTACCTGCGGCCCATAAAGACACGCTCCTGCTGCGGGGCCTCGCCGACCTG
CCGGACGCTGATTACCACGCCCTGGCCCCGCCCGACCCGGCCCCAATCGCCCAAAATTCAGCCAAAATCGCCTGA

Upstream 100 bases:

>100_bases
TGCGCATGGTGGCCCCGATGCTTGGCATCACCGACCGTGACAGCAACCTCGCCCGCCGCCGGGTTGAGGCCAGCCGCTAA
CACCGGCAACCGCCAACACC

Downstream 100 bases:

>100_bases
TCGGCCCGGTTGCCCTTGCGGAACCCACCCCGGCCTCGCCCCTAAAATGTTGCAATCGCGCGCCGCTTTGGCGCAAAAGA
TGCGAACCATTGGGGACATC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MLATLPMYLRDETRAAHDALWSLTRDALRDAGYRDQDGHPAPNALDHATPHTATWTRPDLLLGQVCNLPYRTHVHAVTAR
VGTCDYGLPDTPPGHYFSYFVIRKDDPRDTPAAFATARLAVNEPDSHSGWGAAWTYARQNGFTFTRAVLTGSHSASARAL
ADGRADIACIDAISWQMIRRYDTSARHLRLIARTDTSPGQTLITARRNDPAPIRAAVTQALTALPAAHKDTLLLRGLADL
PDADYHALAPPDPAPIAQNSAKIA

Sequences:

>Translated_264_residues
MLATLPMYLRDETRAAHDALWSLTRDALRDAGYRDQDGHPAPNALDHATPHTATWTRPDLLLGQVCNLPYRTHVHAVTAR
VGTCDYGLPDTPPGHYFSYFVIRKDDPRDTPAAFATARLAVNEPDSHSGWGAAWTYARQNGFTFTRAVLTGSHSASARAL
ADGRADIACIDAISWQMIRRYDTSARHLRLIARTDTSPGQTLITARRNDPAPIRAAVTQALTALPAAHKDTLLLRGLADL
PDADYHALAPPDPAPIAQNSAKIA
>Mature_264_residues
MLATLPMYLRDETRAAHDALWSLTRDALRDAGYRDQDGHPAPNALDHATPHTATWTRPDLLLGQVCNLPYRTHVHAVTAR
VGTCDYGLPDTPPGHYFSYFVIRKDDPRDTPAAFATARLAVNEPDSHSGWGAAWTYARQNGFTFTRAVLTGSHSASARAL
ADGRADIACIDAISWQMIRRYDTSARHLRLIARTDTSPGQTLITARRNDPAPIRAAVTQALTALPAAHKDTLLLRGLADL
PDADYHALAPPDPAPIAQNSAKIA

Specific function: Unknown

COG id: COG3221

COG function: function code P; ABC-type phosphate/phosphonate transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28755; Mature: 28755

Theoretical pI: Translated: 7.76; Mature: 7.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLATLPMYLRDETRAAHDALWSLTRDALRDAGYRDQDGHPAPNALDHATPHTATWTRPDL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
LLGQVCNLPYRTHVHAVTARVGTCDYGLPDTPPGHYFSYFVIRKDDPRDTPAAFATARLA
HHHHHHCCCCHHHHEEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHEEEEE
VNEPDSHSGWGAAWTYARQNGFTFTRAVLTGSHSASARALADGRADIACIDAISWQMIRR
ECCCCCCCCCCCEEEEECCCCCEEEEEEEECCCCCCHHHHHCCCCCEEEHHHHHHHHHHH
YDTSARHLRLIARTDTSPGQTLITARRNDPAPIRAAVTQALTALPAAHKDTLLLRGLADL
HCCCCCEEEEEEECCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCHHEEHHHHCC
PDADYHALAPPDPAPIAQNSAKIA
CCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLATLPMYLRDETRAAHDALWSLTRDALRDAGYRDQDGHPAPNALDHATPHTATWTRPDL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
LLGQVCNLPYRTHVHAVTARVGTCDYGLPDTPPGHYFSYFVIRKDDPRDTPAAFATARLA
HHHHHHCCCCHHHHEEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHEEEEE
VNEPDSHSGWGAAWTYARQNGFTFTRAVLTGSHSASARALADGRADIACIDAISWQMIRR
ECCCCCCCCCCCEEEEECCCCCEEEEEEEECCCCCCHHHHHCCCCCEEEHHHHHHHHHHH
YDTSARHLRLIARTDTSPGQTLITARRNDPAPIRAAVTQALTALPAAHKDTLLLRGLADL
HCCCCCEEEEEEECCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCHHEEHHHHCC
PDADYHALAPPDPAPIAQNSAKIA
CCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA