| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89053606
Identifier: 89053606
GI number: 89053606
Start: 1074533
End: 1075090
Strand: Reverse
Name: 89053606
Synonym: Jann_1115
Alternate gene names: NA
Gene position: 1075090-1074533 (Counterclockwise)
Preceding gene: 89053607
Following gene: 89053592
Centisome position: 24.9
GC content: 66.85
Gene sequence:
>558_bases ATGACCGAGGTGCCCTGGTCCTGTCGCTGCGGCGCGGTTCACGGCACCGTCTCGGTGGAGCGTCGGTCCGGAACACCCGT CGTGTGCCACTGCGACAGCTGCGTCCGGGCGCAGCGCCATTTCGGTGTAGAGGCCACGCGCACGGAGGGTGTGGCGATTT ATCAGACCACGCCGGATCGGGTATCTATCACCGCAGGCGCCGATCATCTGGGCCTCGGGCGGCTCACGCCCAAGGGGGCG TTCCGGTGGTTCACTACCTGTTGCAACACGCAATTGGGCGTGTCGTCCACCACGCCGAAATTCGCGTTCATCGGCTTCGT GCAGACGATTTTTCCCGATACCAGCGCGCTTGGTCGCGCCCGCACCCATGCCTACGTGCCGCAGGCGGGCGGGGCCGACA AACACACGCGCCTGATGCCCTCGATCATGGCCGTGATGTCGCGCAGCGTGTCGGCGCTGACCTCTGGCCGCTGGAAGGAC ACGCCGTTCTTTGACGTGGATACGGGTGCGCCCGTGGCCTCGCCGCAGGTGCTGCCACGGGATGCGGGGCGCCAATAG
Upstream 100 bases:
>100_bases GAATTCATTGACGCCAATTCGGGCATCAAAACGCCCGCCAAACGCGCCAAGCCGAAGCTGGTCGAAGATCCGCCCGTCGA AAACGTCGCGGTCTGATCCG
Downstream 100 bases:
>100_bases ACCTATCGCTTTTGCGATCCTTCCACAGCGTTATCCACAGCTTACTTGCCTAAATCTGGCACTATCCCCGCCCATTCGCC AGAGCGACGCCTTGGGACAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 185; Mature: 184
Protein sequence:
>185_residues MTEVPWSCRCGAVHGTVSVERRSGTPVVCHCDSCVRAQRHFGVEATRTEGVAIYQTTPDRVSITAGADHLGLGRLTPKGA FRWFTTCCNTQLGVSSTTPKFAFIGFVQTIFPDTSALGRARTHAYVPQAGGADKHTRLMPSIMAVMSRSVSALTSGRWKD TPFFDVDTGAPVASPQVLPRDAGRQ
Sequences:
>Translated_185_residues MTEVPWSCRCGAVHGTVSVERRSGTPVVCHCDSCVRAQRHFGVEATRTEGVAIYQTTPDRVSITAGADHLGLGRLTPKGA FRWFTTCCNTQLGVSSTTPKFAFIGFVQTIFPDTSALGRARTHAYVPQAGGADKHTRLMPSIMAVMSRSVSALTSGRWKD TPFFDVDTGAPVASPQVLPRDAGRQ >Mature_184_residues TEVPWSCRCGAVHGTVSVERRSGTPVVCHCDSCVRAQRHFGVEATRTEGVAIYQTTPDRVSITAGADHLGLGRLTPKGAF RWFTTCCNTQLGVSSTTPKFAFIGFVQTIFPDTSALGRARTHAYVPQAGGADKHTRLMPSIMAVMSRSVSALTSGRWKDT PFFDVDTGAPVASPQVLPRDAGRQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19885; Mature: 19754
Theoretical pI: Translated: 9.21; Mature: 9.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEVPWSCRCGAVHGTVSVERRSGTPVVCHCDSCVRAQRHFGVEATRTEGVAIYQTTPDR CCCCCCCCCCCEEECEEEEEECCCCCEEEECHHHHHHHHHCCCEEECCCCEEEEEECCCE VSITAGADHLGLGRLTPKGAFRWFTTCCNTQLGVSSTTPKFAFIGFVQTIFPDTSALGRA EEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCC RTHAYVPQAGGADKHTRLMPSIMAVMSRSVSALTSGRWKDTPFFDVDTGAPVASPQVLPR HHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCCCC DAGRQ CCCCC >Mature Secondary Structure TEVPWSCRCGAVHGTVSVERRSGTPVVCHCDSCVRAQRHFGVEATRTEGVAIYQTTPDR CCCCCCCCCCEEECEEEEEECCCCCEEEECHHHHHHHHHCCCEEECCCCEEEEEECCCE VSITAGADHLGLGRLTPKGAFRWFTTCCNTQLGVSSTTPKFAFIGFVQTIFPDTSALGRA EEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCC RTHAYVPQAGGADKHTRLMPSIMAVMSRSVSALTSGRWKDTPFFDVDTGAPVASPQVLPR HHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCCCC DAGRQ CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA