| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89053528
Identifier: 89053528
GI number: 89053528
Start: 990226
End: 991245
Strand: Reverse
Name: 89053528
Synonym: Jann_1037
Alternate gene names: NA
Gene position: 991245-990226 (Counterclockwise)
Preceding gene: 89053532
Following gene: 89053523
Centisome position: 22.96
GC content: 66.96
Gene sequence:
>1020_bases ATGAAGCGGCTTTTGATCGGGACGGCGGTGGTGGGTGCCTTGGGCGTGATCGCCTGGGGTGGCGTCGCCATGGTGTCCGA GACCGCCGCCACCCGCTGGCTGGACGACCGCCGGGCCGAAGGTTGGGTGGCCAATGTCGCCGACATCTCGGTCAGCGGCT TCCCCTTGCAGTTTGTGACCGAGCTTCAGGATGTGGAATTGGCGGACCCGGATACCGGCCTTGCCTGGTCCGTGGCGTCC TTGGAATTTCGGCAGGACGTCCACCGCCTGGATCGGATTGAGGCGCGTTGGCCCGCTGAGCAGGTGATTGCGTCACCGGT TGAACGGCTGACCGTAGAGGGATCGGACGACGGCGACCTGCACCTGATCGCGGCGTTGGATGTGCAGCCCACGAACCGGT TCGCGCTGGATGCCGTGAACGCGGAAACCGGGCCGTTGCAGGTGACCTCCAGCGCGGGCTGGCAGACGGCGTGGGAGCAG GGCAGCCTGACCCTGCACCGGGTCGCGGAGACGGAGACCACCTATGATCTGGTCGCGCTTGCCACACAGATGGCGCCGCC CGACGCGTGGCGCAACCGTCTGGACCCTGCCGGTGTGTTGCCCGCCGAATTGGACAGCGCGACCGTGCGCGCCATCGCCC GGTTTGACGCCCCCTGGGACATGGACGCCATAGAGACTGCCCGCCCGCAGGTGACCGCGCTGGAGCTTGAAGATGTCAGT CTGCAATGGGGCGACATGCTGTTCCGCGCGACCGGAGCCCTGGAGGTCACGCCCGGCGGTGTGCCGGAGGGGGAGTTGGC GGTGCGGGCCGAAAACTGGTCCGCGATGGTGGATTTGGCCAGCAATGCGGGCGTCGTGCCTGAAAGGTTCCGGGGCACCG CAGAGGCGATGTTGCAAATGCTCGCCGGTCTGTCGGGGCGGCCCGAGAACATCGACACAACGCTGTCGTTTTCCAATGGC CGGATGCTGTTGGGAGGCGTCTTGCCCATCGGTCCGGCCCCCAGCCTGCGCTTGCGATAA
Upstream 100 bases:
>100_bases ACCAGAGACAGCTTGTCTGTCCCGCGGCGTTTCGCGAAAAGCTGAGGTTCAGGTTTCTCGCAAAACGCTATAGGCGATAG GAGCACGGAAGGGGAGAGCG
Downstream 100 bases:
>100_bases GATCAGGCCGGTCTCAGACGGACGTCCGGTGGCCGGGGCGCTTCAGCGGCAGTAAGATCCAGAGCGGTAGGAGGCCACAT CGAAGTGGAAGTGATCCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 339; Mature: 339
Protein sequence:
>339_residues MKRLLIGTAVVGALGVIAWGGVAMVSETAATRWLDDRRAEGWVANVADISVSGFPLQFVTELQDVELADPDTGLAWSVAS LEFRQDVHRLDRIEARWPAEQVIASPVERLTVEGSDDGDLHLIAALDVQPTNRFALDAVNAETGPLQVTSSAGWQTAWEQ GSLTLHRVAETETTYDLVALATQMAPPDAWRNRLDPAGVLPAELDSATVRAIARFDAPWDMDAIETARPQVTALELEDVS LQWGDMLFRATGALEVTPGGVPEGELAVRAENWSAMVDLASNAGVVPERFRGTAEAMLQMLAGLSGRPENIDTTLSFSNG RMLLGGVLPIGPAPSLRLR
Sequences:
>Translated_339_residues MKRLLIGTAVVGALGVIAWGGVAMVSETAATRWLDDRRAEGWVANVADISVSGFPLQFVTELQDVELADPDTGLAWSVAS LEFRQDVHRLDRIEARWPAEQVIASPVERLTVEGSDDGDLHLIAALDVQPTNRFALDAVNAETGPLQVTSSAGWQTAWEQ GSLTLHRVAETETTYDLVALATQMAPPDAWRNRLDPAGVLPAELDSATVRAIARFDAPWDMDAIETARPQVTALELEDVS LQWGDMLFRATGALEVTPGGVPEGELAVRAENWSAMVDLASNAGVVPERFRGTAEAMLQMLAGLSGRPENIDTTLSFSNG RMLLGGVLPIGPAPSLRLR >Mature_339_residues MKRLLIGTAVVGALGVIAWGGVAMVSETAATRWLDDRRAEGWVANVADISVSGFPLQFVTELQDVELADPDTGLAWSVAS LEFRQDVHRLDRIEARWPAEQVIASPVERLTVEGSDDGDLHLIAALDVQPTNRFALDAVNAETGPLQVTSSAGWQTAWEQ GSLTLHRVAETETTYDLVALATQMAPPDAWRNRLDPAGVLPAELDSATVRAIARFDAPWDMDAIETARPQVTALELEDVS LQWGDMLFRATGALEVTPGGVPEGELAVRAENWSAMVDLASNAGVVPERFRGTAEAMLQMLAGLSGRPENIDTTLSFSNG RMLLGGVLPIGPAPSLRLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36424; Mature: 36424
Theoretical pI: Translated: 4.16; Mature: 4.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLLIGTAVVGALGVIAWGGVAMVSETAATRWLDDRRAEGWVANVADISVSGFPLQFVT CCCEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCHHHHH ELQDVELADPDTGLAWSVASLEFRQDVHRLDRIEARWPAEQVIASPVERLTVEGSDDGDL HHHCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHEEECCCCCCCE HLIAALDVQPTNRFALDAVNAETGPLQVTSSAGWQTAWEQGSLTLHRVAETETTYDLVAL EEEEEEECCCCCCEEEEECCCCCCCEEEECCCCCCCHHCCCCEEEEEECCCCCHHHHHHH ATQMAPPDAWRNRLDPAGVLPAELDSATVRAIARFDAPWDMDAIETARPQVTALELEDVS HHHCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHCCCCEEEEEEECCC LQWGDMLFRATGALEVTPGGVPEGELAVRAENWSAMVDLASNAGVVPERFRGTAEAMLQM CHHHHHHEEECCEEEECCCCCCCCCEEEEECCCEEEEEECCCCCCCHHHHCCHHHHHHHH LAGLSGRPENIDTTLSFSNGRMLLGGVLPIGPAPSLRLR HHCCCCCCCCCCEEEEECCCCEEEEEEECCCCCCCCCCC >Mature Secondary Structure MKRLLIGTAVVGALGVIAWGGVAMVSETAATRWLDDRRAEGWVANVADISVSGFPLQFVT CCCEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCHHHHH ELQDVELADPDTGLAWSVASLEFRQDVHRLDRIEARWPAEQVIASPVERLTVEGSDDGDL HHHCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHEEECCCCCCCE HLIAALDVQPTNRFALDAVNAETGPLQVTSSAGWQTAWEQGSLTLHRVAETETTYDLVAL EEEEEEECCCCCCEEEEECCCCCCCEEEECCCCCCCHHCCCCEEEEEECCCCCHHHHHHH ATQMAPPDAWRNRLDPAGVLPAELDSATVRAIARFDAPWDMDAIETARPQVTALELEDVS HHHCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHCCCCEEEEEEECCC LQWGDMLFRATGALEVTPGGVPEGELAVRAENWSAMVDLASNAGVVPERFRGTAEAMLQM CHHHHHHEEECCEEEECCCCCCCCCEEEEECCCEEEEEECCCCCCCHHHHCCHHHHHHHH LAGLSGRPENIDTTLSFSNGRMLLGGVLPIGPAPSLRLR HHCCCCCCCCCCEEEEECCCCEEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA