| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
Click here to switch to the map view.
The map label for this gene is 89053511
Identifier: 89053511
GI number: 89053511
Start: 973178
End: 973765
Strand: Reverse
Name: 89053511
Synonym: Jann_1020
Alternate gene names: NA
Gene position: 973765-973178 (Counterclockwise)
Preceding gene: 89053513
Following gene: 89053510
Centisome position: 22.55
GC content: 68.54
Gene sequence:
>588_bases ATGTCCTGGACCGATGAACGGGTCGAAACGCTAAAGAAAATGTGGGGCGAAGGCCAGTCGGCCAGCCAGATCGCCAAGGA ATTGGGCGGGGTGACGCGCAATGCCGTGATCGGCAAGGTGCATCGCCTGGGCCTGTCCAACCGCTCCGGCGGGGGGGCCT CCACGCCGTCCAAACCCGCCCCTGCCACGAAAGAGGCACCCGCCGCCAAGGCAGCCCCCGCGCCCAAGACGGCCCCCGCG CCCGAGGCAAAGGCCGCTCAACCGGCGGAGGCCGCGCCCGCGCCGCGCACCAATATCATGCCCCTGCGCAAGCCCGTCGC GCCCGCAGGCCAGCCCTTGCCGCCGCAGCCGTCGGCCAATGAGATCAGCCCCGAAGCGCTGGCCAAAGTGTCCGAGGTCG AAAAGCACGCCAAGAAGATCAGCCTGATGGAGCTGACCGAGCGGGTCTGCAAGTGGCCCATCGGTGACCCGGCGACCGAG GAATTCTACTTCTGCGGCCTGCCGGTGCAGCAGGGCAAACCCTATTGCGACGCCCATGTGGGGGTGGCGTTCCAGCCCAT GTCCTCGCGCCGCGACCGGCGTCGGTAA
Upstream 100 bases:
>100_bases CCTCACAATAGGTCTTCCATTCGCGGGTCGTCCGCACCATATAGCCAAGCTGATACTCGAATGCCGCGCGCGGCGGAACG CTAGACCGGAAGGCACATCC
Downstream 100 bases:
>100_bases AGGGGGGCGGGGGCGATGCAGATGCAAGCCCCCATCCCGATCCTGCGCAGTTTCTCCGAGGTGGAGGCCAAAGCGTTCTA CGTCGATTACCTTGGTTTCG
Product: GcrA cell cycle regulator
Products: NA
Alternate protein names: Global Cell Cycle Regulator GcrA; GcrA Cell Cycle Regulator Superfamily; Cell Cycle Regulator GcrA; Gcra Cell Cycle Regulator
Number of amino acids: Translated: 195; Mature: 194
Protein sequence:
>195_residues MSWTDERVETLKKMWGEGQSASQIAKELGGVTRNAVIGKVHRLGLSNRSGGGASTPSKPAPATKEAPAAKAAPAPKTAPA PEAKAAQPAEAAPAPRTNIMPLRKPVAPAGQPLPPQPSANEISPEALAKVSEVEKHAKKISLMELTERVCKWPIGDPATE EFYFCGLPVQQGKPYCDAHVGVAFQPMSSRRDRRR
Sequences:
>Translated_195_residues MSWTDERVETLKKMWGEGQSASQIAKELGGVTRNAVIGKVHRLGLSNRSGGGASTPSKPAPATKEAPAAKAAPAPKTAPA PEAKAAQPAEAAPAPRTNIMPLRKPVAPAGQPLPPQPSANEISPEALAKVSEVEKHAKKISLMELTERVCKWPIGDPATE EFYFCGLPVQQGKPYCDAHVGVAFQPMSSRRDRRR >Mature_194_residues SWTDERVETLKKMWGEGQSASQIAKELGGVTRNAVIGKVHRLGLSNRSGGGASTPSKPAPATKEAPAAKAAPAPKTAPAP EAKAAQPAEAAPAPRTNIMPLRKPVAPAGQPLPPQPSANEISPEALAKVSEVEKHAKKISLMELTERVCKWPIGDPATEE FYFCGLPVQQGKPYCDAHVGVAFQPMSSRRDRRR
Specific function: Unknown
COG id: COG5352
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20730; Mature: 20599
Theoretical pI: Translated: 10.29; Mature: 10.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSWTDERVETLKKMWGEGQSASQIAKELGGVTRNAVIGKVHRLGLSNRSGGGASTPSKPA CCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCC PATKEAPAAKAAPAPKTAPAPEAKAAQPAEAAPAPRTNIMPLRKPVAPAGQPLPPQPSAN CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC EISPEALAKVSEVEKHAKKISLMELTERVCKWPIGDPATEEFYFCGLPVQQGKPYCDAHV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCHHHCCCCCCCCC GVAFQPMSSRRDRRR CEEECCHHHHHCCCC >Mature Secondary Structure SWTDERVETLKKMWGEGQSASQIAKELGGVTRNAVIGKVHRLGLSNRSGGGASTPSKPA CCHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCC PATKEAPAAKAAPAPKTAPAPEAKAAQPAEAAPAPRTNIMPLRKPVAPAGQPLPPQPSAN CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC EISPEALAKVSEVEKHAKKISLMELTERVCKWPIGDPATEEFYFCGLPVQQGKPYCDAHV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCHHHCCCCCCCCC GVAFQPMSSRRDRRR CEEECCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA