Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is yjdJ [C]

Identifier: 89053494

GI number: 89053494

Start: 960689

End: 960970

Strand: Reverse

Name: yjdJ [C]

Synonym: Jann_1003

Alternate gene names: 89053494

Gene position: 960970-960689 (Counterclockwise)

Preceding gene: 89053495

Following gene: 89053492

Centisome position: 22.26

GC content: 65.96

Gene sequence:

>282_bases
ATGTCTGATATCGAACGCCACGTCTCGGACACCAAGGGGCGCTATGTGCTGACCCGCGATGGGGTCGAGGCCGAGCTGAC
CTACTCGATCATGTCGCCCCAACGGATCATCGCCGACCACACCGGTGTGCCGGACGCGTTGCGCGGCTCCGGCGCGGGGC
GGGAGTTGGTGGAACGCCTTGTCGCCGATGCCCGGGCCGAAGGGGTCACGATCATAGCCCTTTGCCCCTTCGTCCGCGCG
CAAGCAAGCCGTCACCCGGAATGGGCCGACGTCTTTTCCTAG

Upstream 100 bases:

>100_bases
CGCACCGGTGAACAGATCCTGGTGACCGAGGGGGACTTCACCTTCGTCGCCATATCGGATTCCGGGATCACGCGACCCCT
TCCAGAAGAGGACAGCGCAG

Downstream 100 bases:

>100_bases
GAATTTGTTCAAAAAGCGCCTTGGGCTGGCGTCAGTTCATCACCTGGAACACGCATCCGTCCGATACCAGATCCGGGGGC
GTGTTGCATAGGCCGCGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: Acetyltransferase; YjdJ Protein; Acetyltransferase-Like

Number of amino acids: Translated: 93; Mature: 92

Protein sequence:

>93_residues
MSDIERHVSDTKGRYVLTRDGVEAELTYSIMSPQRIIADHTGVPDALRGSGAGRELVERLVADARAEGVTIIALCPFVRA
QASRHPEWADVFS

Sequences:

>Translated_93_residues
MSDIERHVSDTKGRYVLTRDGVEAELTYSIMSPQRIIADHTGVPDALRGSGAGRELVERLVADARAEGVTIIALCPFVRA
QASRHPEWADVFS
>Mature_92_residues
SDIERHVSDTKGRYVLTRDGVEAELTYSIMSPQRIIADHTGVPDALRGSGAGRELVERLVADARAEGVTIIALCPFVRAQ
ASRHPEWADVFS

Specific function: Unknown

COG id: COG2388

COG function: function code R; Predicted acetyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10193; Mature: 10061

Theoretical pI: Translated: 5.62; Mature: 5.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDIERHVSDTKGRYVLTRDGVEAELTYSIMSPQRIIADHTGVPDALRGSGAGRELVERL
CCHHHHHHHCCCCCEEEEECCCCEEEEEECCCCHHHHHCCCCCCCCCCCCCCCHHHHHHH
VADARAEGVTIIALCPFVRAQASRHPEWADVFS
HHHHCCCCEEEEEECHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
SDIERHVSDTKGRYVLTRDGVEAELTYSIMSPQRIIADHTGVPDALRGSGAGRELVERL
CHHHHHHHCCCCCEEEEECCCCEEEEEECCCCHHHHHCCCCCCCCCCCCCCCHHHHHHH
VADARAEGVTIIALCPFVRAQASRHPEWADVFS
HHHHCCCCEEEEEECHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA