| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89053491
Identifier: 89053491
GI number: 89053491
Start: 958787
End: 959017
Strand: Reverse
Name: 89053491
Synonym: Jann_1000
Alternate gene names: NA
Gene position: 959017-958787 (Counterclockwise)
Preceding gene: 89053492
Following gene: 89053490
Centisome position: 22.21
GC content: 62.34
Gene sequence:
>231_bases ATGACTAACTTCATCAAAAACTTCGCTGCAGACGAATCCGGCGCCGTGACCGTCGACTGGGTCGTTCTGACCGCCGCCCT CGTGGGCCTGGGCCTGGCCGTCATGGCCGTCGTGTCCGGCGGTGTGGAAGATCTGTCTGCTGAGATCAGTGACTCGCTCG TGGCAGCGAACCCGCTGACCGACGATGTGTTCGCCGACGTGAACCAGCAGACCGGTGGCTCGCTCGACTAA
Upstream 100 bases:
>100_bases GCCCCGATTACCCGTCAAACATCTCTCATCCCAAGGGCAGCGGCCCACAAACGGGACCGCAACCTGGAACAAGACAACTT AAATCAAATTGGAGACTGCC
Downstream 100 bases:
>100_bases GCCTCTCCGGACCTGACGGTCTGATCACAAGCAGCCGTGATGCCCCCAGCATCACGGCTGCTTTTCTTTTTCTTAGCAGC AGCTTTGGGACGTCGAGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 76; Mature: 75
Protein sequence:
>76_residues MTNFIKNFAADESGAVTVDWVVLTAALVGLGLAVMAVVSGGVEDLSAEISDSLVAANPLTDDVFADVNQQTGGSLD
Sequences:
>Translated_76_residues MTNFIKNFAADESGAVTVDWVVLTAALVGLGLAVMAVVSGGVEDLSAEISDSLVAANPLTDDVFADVNQQTGGSLD >Mature_75_residues TNFIKNFAADESGAVTVDWVVLTAALVGLGLAVMAVVSGGVEDLSAEISDSLVAANPLTDDVFADVNQQTGGSLD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7685; Mature: 7553
Theoretical pI: Translated: 3.21; Mature: 3.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNFIKNFAADESGAVTVDWVVLTAALVGLGLAVMAVVSGGVEDLSAEISDSLVAANPLT CCCHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHCCCCCC DDVFADVNQQTGGSLD HHHHHHCCCCCCCCCC >Mature Secondary Structure TNFIKNFAADESGAVTVDWVVLTAALVGLGLAVMAVVSGGVEDLSAEISDSLVAANPLT CCHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHCCCCCC DDVFADVNQQTGGSLD HHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA