| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89053490
Identifier: 89053490
GI number: 89053490
Start: 958248
End: 958478
Strand: Reverse
Name: 89053490
Synonym: Jann_0999
Alternate gene names: NA
Gene position: 958478-958248 (Counterclockwise)
Preceding gene: 89053491
Following gene: 89053489
Centisome position: 22.2
GC content: 58.01
Gene sequence:
>231_bases ATGGCTCTGTCGTACATCAAATCTTTCGCTTCCAATGAATCCGGTGCCGTTACGGTTGACTGGGTTGTCCTGACCGCCGC CCTCGTGGGCCTTGGTCTGGCTGTCATGTCTGTCGTTTCGGGCGGTGTCGAAAACCTGTCGGGCAGCATCGCGACCGACC TGAGCGCCATCAACCCAATTGACGATCCGTTCGCCAACGACAACCAGCAGGCTGCTGACGGCATCGAGTAA
Upstream 100 bases:
>100_bases TCCCTGCGCTTCATTGAACAGCGCCGGTGCAGAACGCGCCTCGATCCACAGACACTTACGGATCGATATTCCTTCTCACT GACTAAAGGGAGTTCCTACA
Downstream 100 bases:
>100_bases TGATTGCGCTGCCTGCCTCGGGTGCCCGTCAAAGGTATCCGGGGCTGGCCTCGGCGAAACCGGTCGAACGTCACCGACAT TCCGTGACACGACCATGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 76; Mature: 75
Protein sequence:
>76_residues MALSYIKSFASNESGAVTVDWVVLTAALVGLGLAVMSVVSGGVENLSGSIATDLSAINPIDDPFANDNQQAADGIE
Sequences:
>Translated_76_residues MALSYIKSFASNESGAVTVDWVVLTAALVGLGLAVMSVVSGGVENLSGSIATDLSAINPIDDPFANDNQQAADGIE >Mature_75_residues ALSYIKSFASNESGAVTVDWVVLTAALVGLGLAVMSVVSGGVENLSGSIATDLSAINPIDDPFANDNQQAADGIE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7670; Mature: 7538
Theoretical pI: Translated: 3.31; Mature: 3.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALSYIKSFASNESGAVTVDWVVLTAALVGLGLAVMSVVSGGVENLSGSIATDLSAINPI CHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHCCCC DDPFANDNQQAADGIE CCCCCCCCCCCCCCCC >Mature Secondary Structure ALSYIKSFASNESGAVTVDWVVLTAALVGLGLAVMSVVSGGVENLSGSIATDLSAINPI HHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHCCCC DDPFANDNQQAADGIE CCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA