| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89053355
Identifier: 89053355
GI number: 89053355
Start: 820165
End: 820581
Strand: Reverse
Name: 89053355
Synonym: Jann_0864
Alternate gene names: NA
Gene position: 820581-820165 (Counterclockwise)
Preceding gene: 89053356
Following gene: 89053354
Centisome position: 19.0
GC content: 65.47
Gene sequence:
>417_bases ATGACCGGGCGCTGTTACTGCGGACGCGCGCGGCTGACGGCCAGCGCGCTGCCGCAAACCGTCACATACTGCCATTGCTC CGACTGCCGCCGCCTGTCCGGCGCGCCGGTCGCGGCCTTTGCCGCCTTCGCGCGGGATCAGGTGAACCTGGCCGATTTTG GTCCGGCCAAAAGCGTCACCCCCGGCGTCAATCGCTGGTTCTGCACTGAGTGTGGCACGCAATTGGCGGCCACCTACGAT TATCTGCCAGATCAGGTCTATGTGCCGATCGGTCTGCTGGATCAGGCGGCAGATCTGCCCGCTGAGGGCCATGGCCATAC CGACAGCGCGCTGCCGTGGCTCCATATCGAAGATGACCTGCCCCGCGATGCCACCTCCGCGCGGGACCGCTTGCAAGAGA CATCCTGCAAGGGCTAA
Upstream 100 bases:
>100_bases CTGACCCTGAAAATGGGCATTGAGAACCTTCTGCGTCACTACATCCCCGAGGTGGTTGAGGTGCGTCCTGTCAACACCTG ACACGACAGCCACCGCCCCG
Downstream 100 bases:
>100_bases GCCGCTCCCATGGCGCATCCGACGATCCTTGCATTCGATACCTCCGGCCCATGGGTTGGCACAGCGCTTCTTCGGGATGG GGACGTGCGCGCCGCCCATT
Product: glutathione-dependent formaldehyde-activating protein
Products: NA
Alternate protein names: Glutathione-Dependent Formaldehyde-Activating Protein
Number of amino acids: Translated: 138; Mature: 137
Protein sequence:
>138_residues MTGRCYCGRARLTASALPQTVTYCHCSDCRRLSGAPVAAFAAFARDQVNLADFGPAKSVTPGVNRWFCTECGTQLAATYD YLPDQVYVPIGLLDQAADLPAEGHGHTDSALPWLHIEDDLPRDATSARDRLQETSCKG
Sequences:
>Translated_138_residues MTGRCYCGRARLTASALPQTVTYCHCSDCRRLSGAPVAAFAAFARDQVNLADFGPAKSVTPGVNRWFCTECGTQLAATYD YLPDQVYVPIGLLDQAADLPAEGHGHTDSALPWLHIEDDLPRDATSARDRLQETSCKG >Mature_137_residues TGRCYCGRARLTASALPQTVTYCHCSDCRRLSGAPVAAFAAFARDQVNLADFGPAKSVTPGVNRWFCTECGTQLAATYDY LPDQVYVPIGLLDQAADLPAEGHGHTDSALPWLHIEDDLPRDATSARDRLQETSCKG
Specific function: Unknown
COG id: COG3791
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14921; Mature: 14790
Theoretical pI: Translated: 5.55; Mature: 5.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.8 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 5.8 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGRCYCGRARLTASALPQTVTYCHCSDCRRLSGAPVAAFAAFARDQVNLADFGPAKSVT CCCCCCCCCCHHCHHHCCCHHEEECCHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCC PGVNRWFCTECGTQLAATYDYLPDQVYVPIGLLDQAADLPAEGHGHTDSALPWLHIEDDL CCCCEEEHHHHHHHHHHHHHCCCCEEEECCCCCCHHHCCCCCCCCCCCCCCCEEEECCCC PRDATSARDRLQETSCKG CCCHHHHHHHHHHHCCCC >Mature Secondary Structure TGRCYCGRARLTASALPQTVTYCHCSDCRRLSGAPVAAFAAFARDQVNLADFGPAKSVT CCCCCCCCCHHCHHHCCCHHEEECCHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCC PGVNRWFCTECGTQLAATYDYLPDQVYVPIGLLDQAADLPAEGHGHTDSALPWLHIEDDL CCCCEEEHHHHHHHHHHHHHCCCCEEEECCCCCCHHHCCCCCCCCCCCCCCCEEEECCCC PRDATSARDRLQETSCKG CCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA