| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is rimI [H]
Identifier: 89053353
GI number: 89053353
Start: 819095
End: 819511
Strand: Reverse
Name: rimI [H]
Synonym: Jann_0862
Alternate gene names: 89053353
Gene position: 819511-819095 (Counterclockwise)
Preceding gene: 89053354
Following gene: 89053352
Centisome position: 18.98
GC content: 67.39
Gene sequence:
>417_bases ATGACCCCCGCCCGGATGGCCGCCCTGCACGGCGCATGCTTCGCGCGCGGTTGGCCCGAGGCGGAGATGGCTGAGCTTCT GGCCAAACCCACGACACTGGCGGCCACAACTGATCATGGCTTCGCGCTTCTGCAACTGATCGCGCCCGAGGCGGAGGTGC TCACCATCATCGTCGACCCTGCGCTGCGCGGGCAGGGTCATGGCCGCGCGCTCCTCGGGCAAGCCCTCCTCGCCGCGCAA AAAGGGGGGGCAGAGACCGTGTTTCTTGAGGTTGACGCCGAGAACGCCCCGGCCCGTGCGCTGTACACGCGCGCAGGGTT CATCCAGACCGGCACGCGAAAGGGCTACTACACCCACAAGACAGGCCGTCACAGCGACGCGATCGTCATGGCGCGTGCCC TGGAACCGGGCATATAA
Upstream 100 bases:
>100_bases TCACAGCCATGCGGCTTGGGACGCCGCAGCCCCGGCCCGCGCCGCTCTATATCAAGCCCGCCGATGCCGCGCCCGCGCGG GAGACCGGGCCGCAGATGTT
Downstream 100 bases:
>100_bases CGCAAACCGAGGGCTCTCCCCCTGCGTCAAGGCCGGAATCGGGTTGACCCCCCGCGCGCCCTTTGCCCTTATTCCCTATG AGGATTCCGTCGCTCGGCGG
Product: GCN5-like N-acetyltransferase
Products: NA
Alternate protein names: Acetylating enzyme for N-terminal of ribosomal protein S18 [H]
Number of amino acids: Translated: 138; Mature: 137
Protein sequence:
>138_residues MTPARMAALHGACFARGWPEAEMAELLAKPTTLAATTDHGFALLQLIAPEAEVLTIIVDPALRGQGHGRALLGQALLAAQ KGGAETVFLEVDAENAPARALYTRAGFIQTGTRKGYYTHKTGRHSDAIVMARALEPGI
Sequences:
>Translated_138_residues MTPARMAALHGACFARGWPEAEMAELLAKPTTLAATTDHGFALLQLIAPEAEVLTIIVDPALRGQGHGRALLGQALLAAQ KGGAETVFLEVDAENAPARALYTRAGFIQTGTRKGYYTHKTGRHSDAIVMARALEPGI >Mature_137_residues TPARMAALHGACFARGWPEAEMAELLAKPTTLAATTDHGFALLQLIAPEAEVLTIIVDPALRGQGHGRALLGQALLAAQK GGAETVFLEVDAENAPARALYTRAGFIQTGTRKGYYTHKTGRHSDAIVMARALEPGI
Specific function: This enzyme acetylates the N-terminal alanine of ribosomal protein S18 [H]
COG id: COG0456
COG function: function code R; Acetyltransferases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI2367381, Length=92, Percent_Identity=44.5652173913043, Blast_Score=72, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 - InterPro: IPR006464 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: =2.3.1.128 [H]
Molecular weight: Translated: 14575; Mature: 14444
Theoretical pI: Translated: 7.73; Mature: 7.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPARMAALHGACFARGWPEAEMAELLAKPTTLAATTDHGFALLQLIAPEAEVLTIIVDP CCCHHHHHHHHHHHHCCCCCHHHHHHHCCCCEEEEECCCCCEEEEECCCCCEEEEEEECC ALRGQGHGRALLGQALLAAQKGGAETVFLEVDAENAPARALYTRAGFIQTGTRKGYYTHK CCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCEEEECCCEEECCCCCCEEECC TGRHSDAIVMARALEPGI CCCCCCCEEEEECCCCCC >Mature Secondary Structure TPARMAALHGACFARGWPEAEMAELLAKPTTLAATTDHGFALLQLIAPEAEVLTIIVDP CCHHHHHHHHHHHHCCCCCHHHHHHHCCCCEEEEECCCCCEEEEECCCCCEEEEEEECC ALRGQGHGRALLGQALLAAQKGGAETVFLEVDAENAPARALYTRAGFIQTGTRKGYYTHK CCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCEEEECCCEEECCCCCCEEECC TGRHSDAIVMARALEPGI CCCCCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]