| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89053306
Identifier: 89053306
GI number: 89053306
Start: 773431
End: 773994
Strand: Reverse
Name: 89053306
Synonym: Jann_0815
Alternate gene names: NA
Gene position: 773994-773431 (Counterclockwise)
Preceding gene: 89053307
Following gene: 89053305
Centisome position: 17.92
GC content: 63.3
Gene sequence:
>564_bases ATGATATCCTGGATCCTACTTATCGCGGGGCTCGCCCTGTGGGTCGCAGCGCACGCCTGGAAACGAGTCGCGCCCGCGCA TCGGGCCAGCTTCGGGGACAAGGGCAAAGGTATCGTTGCAGGCCTTGTCGTTCTTTCGGTCATTCTGATGGTGATCGGGT ACCGGGGTGCTGAAGGTGCGTTCTACTGGGGCCGCTCACCGGCATTGGTCGGCATCAACAACATCCTGATGGTGTTGGCA TTCTACATCTACGCAGTGGGCGGGCCGAAGGGGGACCGTGTCTGGCTCGGCACCAAGCTGCGCCACCCGCAGCTCACCGG GTACAGCCTCTGGGCGATCGCGCACCTTCTGGTCAACGGCGACACGCCGTCCTTCGTATTGTTCGGCGGCCTTCTGGTCT GGGCGCTCGGCTCCGTGGTTGCGATCAACGCGGCGGAGGGACCGTGGACGCCGCCGAACCGCGCGCCGAAGCGCAAAGAG CTGACCTATGTCATTGCCACCGTGGTCATCGTCGTCGTTGTCATGCTGATCCACTGGGCGCTTGGCGTTCAACCCTGGGG ATAG
Upstream 100 bases:
>100_bases GCGTCGCCGTTGTGGATGGTAAGATTGTCGAGAACCTGCACGTTGAAACCGCCCGCGCCACCCTGGCGAAATCAGAGGCC ATCGCCGCATTGGAGACCGC
Downstream 100 bases:
>100_bases ACCGATGCCGATGATCTACCGCCTGCTCACCGAGGATGACACATCCGCCTTCTGCCACAAGGTCTCGGACGCGCTGGCCA AAGGCTGGGTTCTGTACGGC
Product: NnrU
Products: NA
Alternate protein names: NnrU Protein; NnrUfamily Protein
Number of amino acids: Translated: 187; Mature: 187
Protein sequence:
>187_residues MISWILLIAGLALWVAAHAWKRVAPAHRASFGDKGKGIVAGLVVLSVILMVIGYRGAEGAFYWGRSPALVGINNILMVLA FYIYAVGGPKGDRVWLGTKLRHPQLTGYSLWAIAHLLVNGDTPSFVLFGGLLVWALGSVVAINAAEGPWTPPNRAPKRKE LTYVIATVVIVVVVMLIHWALGVQPWG
Sequences:
>Translated_187_residues MISWILLIAGLALWVAAHAWKRVAPAHRASFGDKGKGIVAGLVVLSVILMVIGYRGAEGAFYWGRSPALVGINNILMVLA FYIYAVGGPKGDRVWLGTKLRHPQLTGYSLWAIAHLLVNGDTPSFVLFGGLLVWALGSVVAINAAEGPWTPPNRAPKRKE LTYVIATVVIVVVVMLIHWALGVQPWG >Mature_187_residues MISWILLIAGLALWVAAHAWKRVAPAHRASFGDKGKGIVAGLVVLSVILMVIGYRGAEGAFYWGRSPALVGINNILMVLA FYIYAVGGPKGDRVWLGTKLRHPQLTGYSLWAIAHLLVNGDTPSFVLFGGLLVWALGSVVAINAAEGPWTPPNRAPKRKE LTYVIATVVIVVVVMLIHWALGVQPWG
Specific function: Unknown
COG id: COG4094
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20155; Mature: 20155
Theoretical pI: Translated: 10.70; Mature: 10.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISWILLIAGLALWVAAHAWKRVAPAHRASFGDKGKGIVAGLVVLSVILMVIGYRGAEGA CHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC FYWGRSPALVGINNILMVLAFYIYAVGGPKGDRVWLGTKLRHPQLTGYSLWAIAHLLVNG EEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCC DTPSFVLFGGLLVWALGSVVAINAAEGPWTPPNRAPKRKELTYVIATVVIVVVVMLIHWA CCCHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH LGVQPWG HCCCCCC >Mature Secondary Structure MISWILLIAGLALWVAAHAWKRVAPAHRASFGDKGKGIVAGLVVLSVILMVIGYRGAEGA CHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC FYWGRSPALVGINNILMVLAFYIYAVGGPKGDRVWLGTKLRHPQLTGYSLWAIAHLLVNG EEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCC DTPSFVLFGGLLVWALGSVVAINAAEGPWTPPNRAPKRKELTYVIATVVIVVVVMLIHWA CCCHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH LGVQPWG HCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA