| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89053249
Identifier: 89053249
GI number: 89053249
Start: 722424
End: 722933
Strand: Reverse
Name: 89053249
Synonym: Jann_0758
Alternate gene names: NA
Gene position: 722933-722424 (Counterclockwise)
Preceding gene: 89053250
Following gene: 89053248
Centisome position: 16.74
GC content: 64.71
Gene sequence:
>510_bases ATGCGCTACCTTCTTGTCGCCCTTGCCCTCTGCCTCGCCCCCCCGGCCACCGCACAAACCTGCGCTTTGGAATTCACCAT AGAGGTGACCCAGGGCGTGGGCTTTATCCGTCCCGGCACGCAACTGCCCGGCACGGCGGAGTTTGAAACCAGCGGCCAGA CCTTCCGGCAGGAGGGCGGCACCATGGCCCATTACGCCACAGGCCAGATGACGCTTGGCGATGACATTTCCGGCCCGATC TGGACCCTGATCACCACCTCCCGTGGATTTGCCGCGGATCTGATCGGTGTCTACGCCAATGACGTGGAGGGGTTTTCCTT CGCCGGAACAGACTTCAACGGGCCCATGGCGCTGACGCTGTTTGGCGAACCGGGTACAAGGCCCGACACGGCCCCACCGA TGACCCAGCCTGAATGGGACGCGATGGACCTGCGCCGCTCGTTCACGCTGCACGCCGATGGCGACATGCTGGCAGGCGAC GTGGTGGCGCTGGCCGCCGAGTGTACGTGA
Upstream 100 bases:
>100_bases GCCCATCGCGCACAGATACCCGGCACCGCAAGCTGACCTGCCCTACAGCGATCCGCCGTGCCGGTTTGGCGCGGCGCAAA ACTGTGCTACCTCTTTCTCC
Downstream 100 bases:
>100_bases AATCTCGCCGACCGATTGACTCCCTACACCAACCGCCCTATTCCCCGCATCAATAGCCGGAAAGCCAAGCTTCCCGGTCC CGCGCGCGTCCGCAGGATCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 169; Mature: 169
Protein sequence:
>169_residues MRYLLVALALCLAPPATAQTCALEFTIEVTQGVGFIRPGTQLPGTAEFETSGQTFRQEGGTMAHYATGQMTLGDDISGPI WTLITTSRGFAADLIGVYANDVEGFSFAGTDFNGPMALTLFGEPGTRPDTAPPMTQPEWDAMDLRRSFTLHADGDMLAGD VVALAAECT
Sequences:
>Translated_169_residues MRYLLVALALCLAPPATAQTCALEFTIEVTQGVGFIRPGTQLPGTAEFETSGQTFRQEGGTMAHYATGQMTLGDDISGPI WTLITTSRGFAADLIGVYANDVEGFSFAGTDFNGPMALTLFGEPGTRPDTAPPMTQPEWDAMDLRRSFTLHADGDMLAGD VVALAAECT >Mature_169_residues MRYLLVALALCLAPPATAQTCALEFTIEVTQGVGFIRPGTQLPGTAEFETSGQTFRQEGGTMAHYATGQMTLGDDISGPI WTLITTSRGFAADLIGVYANDVEGFSFAGTDFNGPMALTLFGEPGTRPDTAPPMTQPEWDAMDLRRSFTLHADGDMLAGD VVALAAECT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17887; Mature: 17887
Theoretical pI: Translated: 3.93; Mature: 3.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRYLLVALALCLAPPATAQTCALEFTIEVTQGVGFIRPGTQLPGTAEFETSGQTFRQEGG CHHHHHHHHHHHCCCCCCCEEEEEEEEEEECCCEEECCCCCCCCCCEECCCCHHHHHCCC TMAHYATGQMTLGDDISGPIWTLITTSRGFAADLIGVYANDVEGFSFAGTDFNGPMALTL EEEEEECCCEEECCCCCCCEEEEEECCCCCHHHHHHHHCCCCCCCEEECCCCCCCEEEEE FGEPGTRPDTAPPMTQPEWDAMDLRRSFTLHADGDMLAGDVVALAAECT ECCCCCCCCCCCCCCCCCCCHHHHHHEEEEECCCCEECCCEEEEEECCC >Mature Secondary Structure MRYLLVALALCLAPPATAQTCALEFTIEVTQGVGFIRPGTQLPGTAEFETSGQTFRQEGG CHHHHHHHHHHHCCCCCCCEEEEEEEEEEECCCEEECCCCCCCCCCEECCCCHHHHHCCC TMAHYATGQMTLGDDISGPIWTLITTSRGFAADLIGVYANDVEGFSFAGTDFNGPMALTL EEEEEECCCEEECCCCCCCEEEEEECCCCCHHHHHHHHCCCCCCCEEECCCCCCCEEEEE FGEPGTRPDTAPPMTQPEWDAMDLRRSFTLHADGDMLAGDVVALAAECT ECCCCCCCCCCCCCCCCCCCHHHHHHEEEEECCCCEECCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA