| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89053243
Identifier: 89053243
GI number: 89053243
Start: 718244
End: 718756
Strand: Reverse
Name: 89053243
Synonym: Jann_0752
Alternate gene names: NA
Gene position: 718756-718244 (Counterclockwise)
Preceding gene: 89053244
Following gene: 89053242
Centisome position: 16.65
GC content: 61.4
Gene sequence:
>513_bases ATGATCCCGACGCTGCAAACCGAACACCTGACCCTGCGCGGCCCCGAGGCCCGTGATTGGCCCGCCTTTCGCGATTACTT CGCGTCGGATCGGTCTCGCTACACAGGTGGTCCCGCTGAAGATGATAAGAAGTCCTGGATCCTATTCGCCGCCGAGATCG GCCATTGGCACCTGCGTGGATTTGGCATGTGGAGCGTAACGTTGAAGGATGACACGCCTATTGGCCTTGTCGGCTGCTGG TATCCGGATCTTTGGCCCGAGCAGGAGATCGGCTGGCTGATGTGGGATGGCTATGAGGGCAAAGGATATGCCTTTGAGGC CGCAACAGCCGCGCGCGCTCAGTGCTATGGGCCATTTGGCTGGCCCACTGCCGTCAGCTATATCCACCGCGACAACGCGC GCTCCATTGCTTTGGCCAAGCGCCTTGGCTGCACCCAGGACACCGAAGCCGTCCACCCAAACGCCGATGCGCTCGTCTTC CGCCATCCCTCACCGGCGGAGGTGTTGGCATGA
Upstream 100 bases:
>100_bases TGGCGCAAAAGCTTGGCTGCGGCCCCGATGGCACCTTCACCCATGAGGTCTTCGGCACGATGCATATCTGGCGTCACCCT TCACCGGCGGAGGTGTTGGC
Downstream 100 bases:
>100_bases CGATACTTCACACCGACCGCCTGACCCTGCGCTTGCCACGCCTGGCTGACTGGGACGCTTACCGCGATTTCTATACCTCG GACGCCAGCCTTGCCGTTGG
Product: GCN5-like N-acetyltransferase
Products: NA
Alternate protein names: GCN5-Related N-Acetyltransferase; Acetyltransferase Gnat Family; Acetyltranferase; Acetyltransferase GNAT Family; Ribosomal-Protein-Alanine Acetyltransferase; GNAT Family Acetyltransferase; Acetyltransferase Protein; GCN5-Like N-Acetyltransferase; Gcn5-Related N-Acetyltransferase; Acetyltransferase Family
Number of amino acids: Translated: 170; Mature: 170
Protein sequence:
>170_residues MIPTLQTEHLTLRGPEARDWPAFRDYFASDRSRYTGGPAEDDKKSWILFAAEIGHWHLRGFGMWSVTLKDDTPIGLVGCW YPDLWPEQEIGWLMWDGYEGKGYAFEAATAARAQCYGPFGWPTAVSYIHRDNARSIALAKRLGCTQDTEAVHPNADALVF RHPSPAEVLA
Sequences:
>Translated_170_residues MIPTLQTEHLTLRGPEARDWPAFRDYFASDRSRYTGGPAEDDKKSWILFAAEIGHWHLRGFGMWSVTLKDDTPIGLVGCW YPDLWPEQEIGWLMWDGYEGKGYAFEAATAARAQCYGPFGWPTAVSYIHRDNARSIALAKRLGCTQDTEAVHPNADALVF RHPSPAEVLA >Mature_170_residues MIPTLQTEHLTLRGPEARDWPAFRDYFASDRSRYTGGPAEDDKKSWILFAAEIGHWHLRGFGMWSVTLKDDTPIGLVGCW YPDLWPEQEIGWLMWDGYEGKGYAFEAATAARAQCYGPFGWPTAVSYIHRDNARSIALAKRLGCTQDTEAVHPNADALVF RHPSPAEVLA
Specific function: Unknown
COG id: COG1670
COG function: function code J; Acetyltransferases, including N-acetylases of ribosomal proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19157; Mature: 19157
Theoretical pI: Translated: 5.55; Mature: 5.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPTLQTEHLTLRGPEARDWPAFRDYFASDRSRYTGGPAEDDKKSWILFAAEIGHWHLRG CCCCCCCCEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCEEEEE FGMWSVTLKDDTPIGLVGCWYPDLWPEQEIGWLMWDGYEGKGYAFEAATAARAQCYGPFG EEEEEEEECCCCCEEEEEECCCCCCCCCCCCEEEEECCCCCCEEEECCCCCHHEECCCCC WPTAVSYIHRDNARSIALAKRLGCTQDTEAVHPNADALVFRHPSPAEVLA CHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCHHHCC >Mature Secondary Structure MIPTLQTEHLTLRGPEARDWPAFRDYFASDRSRYTGGPAEDDKKSWILFAAEIGHWHLRG CCCCCCCCEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCEEEEE FGMWSVTLKDDTPIGLVGCWYPDLWPEQEIGWLMWDGYEGKGYAFEAATAARAQCYGPFG EEEEEEEECCCCCEEEEEECCCCCCCCCCCCEEEEECCCCCCEEEECCCCCHHEECCCCC WPTAVSYIHRDNARSIALAKRLGCTQDTEAVHPNADALVFRHPSPAEVLA CHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA