| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
Click here to switch to the map view.
The map label for this gene is paaX [C]
Identifier: 89053150
GI number: 89053150
Start: 630190
End: 630987
Strand: Direct
Name: paaX [C]
Synonym: Jann_0659
Alternate gene names: 89053150
Gene position: 630190-630987 (Clockwise)
Preceding gene: 89053149
Following gene: 89053152
Centisome position: 14.59
GC content: 68.3
Gene sequence:
>798_bases GTGGCAGACGCATCTGACCCCATCCGCCCCCTTGTGGAGGCGCTGAACGCCGAGGCACCGCTGAAGCTTTGGTCGGTGCT GGTCACCTGTCTGGGGGATGTCAGCCGCGACGGCGTGATCGAAGTTTCGGGCGTGGCGCTGTCGTCCTTTGTGGAACGTA TGGGGCTGCAACCGCAGGCGATGCGGGTCGCGTTGCATCGGCTGAAGCGGGACGGATGGGTGGAGAGCCGCCGCCTGGGC CGGGTTGGATTTCACCGCCTCTCGGACAGTGCGCTGACGCAGACCCGCGCCGTGGCTGGCCGGATCTACGGACCCGGCGC CGGACCCGCCCCTTGGCATCTGGCCGGAATGCCGCCCGACGCGCCCGATGGGCTGTCACTTCTGCCGGACACGCTGTCGG CGACCCCGATCTCCCGCAGGTTCGCGTTGATCTGTGGGCCGCTTGAGGATGTGCCGGAGGATTGGCTGCTGACCGCGCCG TCGGGGCGGGGTCTTCCGGTGTGGGTGCAAGATGTGGTGGTGGAGGCGGGGTGCGAGGCCGAGTTCAAAGCGTTGGAGCG CACGCTGGCCCAGATCGACAAGGTGCCCGACACGCGGTTGGAGCGGTTCACGTTGCGGGTGCTGGTCCTGCACGCATGGC GGCGCCTGATCCTGAGGTCCAGCCCGGCGGCGGAGGCCGCATTGGGCGGGGCGCGCGCAGAGATATCCTGCCGCGCACGG GTTCATCAGCTTTTGGATCAGCTGGGCTCGGTCGAGCCTGACTGGGATTTGCCCGCAACCGAAGACGCCGCATCGTGA
Upstream 100 bases:
>100_bases TCAGTAATCAGGATGGCGATGCGGTGGCGGAATACGAGCTGCTGACGATGGTGGCGAAATGACTGGGGTTGCGAAATGAC TGGGACTGCGAAGTAGGGCC
Downstream 100 bases:
>100_bases GGCGCCCTTGCCGCATAGGGAGCCCGCGCCGTGGCATTGCCCGCATGGGCCACTTTGGTGGCGAGGCGGATAAACTCGGT GCGTTCGTCGCTCGACAATC
Product: PaaX-like
Products: NA
Alternate protein names: PaaX-Like; PaaX Family Transcriptional Regulator; PaaX Domain-Containing Protein
Number of amino acids: Translated: 265; Mature: 264
Protein sequence:
>265_residues MADASDPIRPLVEALNAEAPLKLWSVLVTCLGDVSRDGVIEVSGVALSSFVERMGLQPQAMRVALHRLKRDGWVESRRLG RVGFHRLSDSALTQTRAVAGRIYGPGAGPAPWHLAGMPPDAPDGLSLLPDTLSATPISRRFALICGPLEDVPEDWLLTAP SGRGLPVWVQDVVVEAGCEAEFKALERTLAQIDKVPDTRLERFTLRVLVLHAWRRLILRSSPAAEAALGGARAEISCRAR VHQLLDQLGSVEPDWDLPATEDAAS
Sequences:
>Translated_265_residues MADASDPIRPLVEALNAEAPLKLWSVLVTCLGDVSRDGVIEVSGVALSSFVERMGLQPQAMRVALHRLKRDGWVESRRLG RVGFHRLSDSALTQTRAVAGRIYGPGAGPAPWHLAGMPPDAPDGLSLLPDTLSATPISRRFALICGPLEDVPEDWLLTAP SGRGLPVWVQDVVVEAGCEAEFKALERTLAQIDKVPDTRLERFTLRVLVLHAWRRLILRSSPAAEAALGGARAEISCRAR VHQLLDQLGSVEPDWDLPATEDAAS >Mature_264_residues ADASDPIRPLVEALNAEAPLKLWSVLVTCLGDVSRDGVIEVSGVALSSFVERMGLQPQAMRVALHRLKRDGWVESRRLGR VGFHRLSDSALTQTRAVAGRIYGPGAGPAPWHLAGMPPDAPDGLSLLPDTLSATPISRRFALICGPLEDVPEDWLLTAPS GRGLPVWVQDVVVEAGCEAEFKALERTLAQIDKVPDTRLERFTLRVLVLHAWRRLILRSSPAAEAALGGARAEISCRARV HQLLDQLGSVEPDWDLPATEDAAS
Specific function: Negative Regulator Of The Paaz And Paaabcdefghijk Catabolic Operons. Binds The Consensus Sequence 5'- Wwtrtgattcgygwt-3'. Binding Of Paax Is Specifically Inhibited By Phenylacetyl-Coenzyme A. [C]
COG id: COG3327
COG function: function code K; Phenylacetic acid-responsive transcriptional repressor
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28676; Mature: 28545
Theoretical pI: Translated: 5.70; Mature: 5.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADASDPIRPLVEALNAEAPLKLWSVLVTCLGDVSRDGVIEVSGVALSSFVERMGLQPQA CCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHCCCHHH MRVALHRLKRDGWVESRRLGRVGFHRLSDSALTQTRAVAGRIYGPGAGPAPWHLAGMPPD HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCEECCCCCCCCEEECCCCCC APDGLSLLPDTLSATPISRRFALICGPLEDVPEDWLLTAPSGRGLPVWVQDVVVEAGCEA CCCCCHHCCCHHCCCCHHHHHHEEECCHHHCCCCCEEECCCCCCCCHHHHHHHHHCCCCH EFKALERTLAQIDKVPDTRLERFTLRVLVLHAWRRLILRSSPAAEAALGGARAEISCRAR HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHH VHQLLDQLGSVEPDWDLPATEDAAS HHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure ADASDPIRPLVEALNAEAPLKLWSVLVTCLGDVSRDGVIEVSGVALSSFVERMGLQPQA CCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHCCCHHH MRVALHRLKRDGWVESRRLGRVGFHRLSDSALTQTRAVAGRIYGPGAGPAPWHLAGMPPD HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCEECCCCCCCCEEECCCCCC APDGLSLLPDTLSATPISRRFALICGPLEDVPEDWLLTAPSGRGLPVWVQDVVVEAGCEA CCCCCHHCCCHHCCCCHHHHHHEEECCHHHCCCCCEEECCCCCCCCHHHHHHHHHCCCCH EFKALERTLAQIDKVPDTRLERFTLRVLVLHAWRRLILRSSPAAEAALGGARAEISCRAR HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHH VHQLLDQLGSVEPDWDLPATEDAAS HHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA