| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is paaC [H]
Identifier: 89053144
GI number: 89053144
Start: 623999
End: 624757
Strand: Reverse
Name: paaC [H]
Synonym: Jann_0653
Alternate gene names: 89053144
Gene position: 624757-623999 (Counterclockwise)
Preceding gene: 89053145
Following gene: 89053143
Centisome position: 14.47
GC content: 62.71
Gene sequence:
>759_bases ATGCCCGATGTGATCCAAGACCGGGCGGACAAGGCCCTGTTCGAGTTTCTCCTGCGGATGGGCGACAACACCCTGATCCT CGGCCACCGCCTGTCGGAATGGTGCGGCAAGGGGCCGGTGCTGGAAGAAGACATCGCACTGGCCAACACGGCGCTGGATT TCATCGGACAGACCCAGATGTGGCTTGGCCTGGCCGGAGAGGTGGAGGGCAAAGGCCGCTCCGCCGACGATCTGGCGATG CTGCGCGATGCGTGGGATTTCCGCTGTTGCCTGCTGGTGCAACAGCCCAACGGTCATTTCGGCCAAACACTAATGCGGCA ATTTCTGTTTGATAACTGGCACTTGAGTATGCTGCTCAACCTTGAGCAGCACTCCAATGACCAGATCGCCGCCATCGCCG CCAAATCCGCGAAAGAGGCGACATACCACGTGGAACGCTCCTCCGATCTGGTGATCCGCCTGGGCGATGGAACGGATGAA AGCCGGGCCAGGATGCAGGCGTCGCTCGACCTTCTCTATCCCTATGTGGGCGAATTGTTCACCGAAGACACCAGCCTGCC CGGCATTGATCCGGCCCCCCTGCGCCCCGCCTTCGATGCGACCATCGGCGCGGTGCTGGACGAGGCCACGCTGAGCGTCC CCGAAAGCCGGTTCGCCCATCAGGGCGGTTACACCGGCGCGCGCCATTCCGAGCATCTGGGCCACCTGCTCACGCAGATG CAGTGGCTCCAGCGCGCCTATCCCGGTGCCCAATGGTAA
Upstream 100 bases:
>100_bases CCAGCCCCTCCAAGAAGGGCCCGATGTTCGATCCGGCAGATGACAAGACCTACCGCCACCCCACCTTCTTCGACATCCCC AAAGACGTGGGGCCGATGTG
Downstream 100 bases:
>100_bases CCCCTGCGACAAAACCATCGACGGATCAGATCTGGACCTGGCTCGACGCCGTCCCGGACCCGGAAATCCCGGTGATTTCC GTCGTCGATCTTGGCATCGT
Product: phenylacetate-CoA oxygenase subunit PaaI
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 252; Mature: 251
Protein sequence:
>252_residues MPDVIQDRADKALFEFLLRMGDNTLILGHRLSEWCGKGPVLEEDIALANTALDFIGQTQMWLGLAGEVEGKGRSADDLAM LRDAWDFRCCLLVQQPNGHFGQTLMRQFLFDNWHLSMLLNLEQHSNDQIAAIAAKSAKEATYHVERSSDLVIRLGDGTDE SRARMQASLDLLYPYVGELFTEDTSLPGIDPAPLRPAFDATIGAVLDEATLSVPESRFAHQGGYTGARHSEHLGHLLTQM QWLQRAYPGAQW
Sequences:
>Translated_252_residues MPDVIQDRADKALFEFLLRMGDNTLILGHRLSEWCGKGPVLEEDIALANTALDFIGQTQMWLGLAGEVEGKGRSADDLAM LRDAWDFRCCLLVQQPNGHFGQTLMRQFLFDNWHLSMLLNLEQHSNDQIAAIAAKSAKEATYHVERSSDLVIRLGDGTDE SRARMQASLDLLYPYVGELFTEDTSLPGIDPAPLRPAFDATIGAVLDEATLSVPESRFAHQGGYTGARHSEHLGHLLTQM QWLQRAYPGAQW >Mature_251_residues PDVIQDRADKALFEFLLRMGDNTLILGHRLSEWCGKGPVLEEDIALANTALDFIGQTQMWLGLAGEVEGKGRSADDLAML RDAWDFRCCLLVQQPNGHFGQTLMRQFLFDNWHLSMLLNLEQHSNDQIAAIAAKSAKEATYHVERSSDLVIRLGDGTDES RARMQASLDLLYPYVGELFTEDTSLPGIDPAPLRPAFDATIGAVLDEATLSVPESRFAHQGGYTGARHSEHLGHLLTQMQ WLQRAYPGAQW
Specific function: May be part of a multicomponent oxygenase involved in phenylacetyl-CoA hydroxylation [H]
COG id: COG3396
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787656, Length=247, Percent_Identity=45.3441295546559, Blast_Score=206, Evalue=1e-54,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012347 - InterPro: IPR009078 - InterPro: IPR011882 - InterPro: IPR007814 [H]
Pfam domain/function: PF05138 PaaA_PaaC [H]
EC number: NA
Molecular weight: Translated: 28079; Mature: 27948
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDVIQDRADKALFEFLLRMGDNTLILGHRLSEWCGKGPVLEEDIALANTALDFIGQTQM CCCHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHH WLGLAGEVEGKGRSADDLAMLRDAWDFRCCLLVQQPNGHFGQTLMRQFLFDNWHLSMLLN HHEECCCCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCEEEEEE LEQHSNDQIAAIAAKSAKEATYHVERSSDLVIRLGDGTDESRARMQASLDLLYPYVGELF EHHCCCCCEEEEEHHHHHHHEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH TEDTSLPGIDPAPLRPAFDATIGAVLDEATLSVPESRFAHQGGYTGARHSEHLGHLLTQM HCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCHHHHHHHHHHHH QWLQRAYPGAQW HHHHHHCCCCCC >Mature Secondary Structure PDVIQDRADKALFEFLLRMGDNTLILGHRLSEWCGKGPVLEEDIALANTALDFIGQTQM CCHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHH WLGLAGEVEGKGRSADDLAMLRDAWDFRCCLLVQQPNGHFGQTLMRQFLFDNWHLSMLLN HHEECCCCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCEEEEEE LEQHSNDQIAAIAAKSAKEATYHVERSSDLVIRLGDGTDESRARMQASLDLLYPYVGELF EHHCCCCCEEEEEHHHHHHHEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH TEDTSLPGIDPAPLRPAFDATIGAVLDEATLSVPESRFAHQGGYTGARHSEHLGHLLTQM HCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCHHHHHHHHHHHH QWLQRAYPGAQW HHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9748275; 9278503; 10766858 [H]