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The map label for this gene is yidD [C]

Identifier: 89053131

GI number: 89053131

Start: 613063

End: 613284

Strand: Reverse

Name: yidD [C]

Synonym: Jann_0640

Alternate gene names: 89053131

Gene position: 613284-613063 (Counterclockwise)

Preceding gene: 89053132

Following gene: 89053129

Centisome position: 14.2

GC content: 63.96

Gene sequence:

>222_bases
ATGAACCCGGCCGCCTTTCTGATCTCCCTGCCGATCCGCTTCTACCGCTTGGTGATCTCACCCATGATCGCATCGAACTG
CCGCTACACGCCGACATGTTCAAGCTACGCGATGGAGGCGTTGCGCAAACATGGCGCGATCAAGGGGACGTGGCTGGCCG
CGCGCCGCGTCTCCCGGTGCCATCCATGGGGCGGGTCGGGCATCGACAACGTGCCGGACTAG

Upstream 100 bases:

>100_bases
GTTGGGATTACGTCCTGATTGGCCGCAAGGACGCGACGGCCACCCATGATTTCAAGGCGATGCAGGCCGATCTGGCGCGT
GCGTTGCGAAAGGCCCACCG

Downstream 100 bases:

>100_bases
GGCGTCGCGCCCCTAGCGCCGCTCAAACGTGATGATCACTTCGCCGATGGGCACGCCAAACCGGCTCATATAGGCACGGT
TCAGCACCCGGTCCGCGCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 73; Mature: 73

Protein sequence:

>73_residues
MNPAAFLISLPIRFYRLVISPMIASNCRYTPTCSSYAMEALRKHGAIKGTWLAARRVSRCHPWGGSGIDNVPD

Sequences:

>Translated_73_residues
MNPAAFLISLPIRFYRLVISPMIASNCRYTPTCSSYAMEALRKHGAIKGTWLAARRVSRCHPWGGSGIDNVPD
>Mature_73_residues
MNPAAFLISLPIRFYRLVISPMIASNCRYTPTCSSYAMEALRKHGAIKGTWLAARRVSRCHPWGGSGIDNVPD

Specific function: Unknown

COG id: COG0759

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0161 family

Homologues:

Organism=Escherichia coli, GI87082322, Length=72, Percent_Identity=48.6111111111111, Blast_Score=81, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y640_JANSC (Q28UQ5)

Other databases:

- EMBL:   CP000264
- RefSeq:   YP_508582.1
- STRING:   Q28UQ5
- GeneID:   3933082
- GenomeReviews:   CP000264_GR
- KEGG:   jan:Jann_0640
- eggNOG:   COG0759
- HOGENOM:   HBG634291
- OMA:   RYCISPL
- BioCyc:   JSP290400:JANN_0640-MONOMER
- HAMAP:   MF_00386
- InterPro:   IPR002696
- ProDom:   PD004225
- TIGRFAMs:   TIGR00278

Pfam domain/function: PF01809 DUF37

EC number: NA

Molecular weight: Translated: 8095; Mature: 8095

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.1 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
8.2 %Cys+Met (Translated Protein)
4.1 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
8.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPAAFLISLPIRFYRLVISPMIASNCRYTPTCSSYAMEALRKHGAIKGTWLAARRVSRC
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHC
HPWGGSGIDNVPD
CCCCCCCCCCCCC
>Mature Secondary Structure
MNPAAFLISLPIRFYRLVISPMIASNCRYTPTCSSYAMEALRKHGAIKGTWLAARRVSRC
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHC
HPWGGSGIDNVPD
CCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA