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The map label for this gene is oxaA

Identifier: 89053128

GI number: 89053128

Start: 608514

End: 610394

Strand: Reverse

Name: oxaA

Synonym: Jann_0637

Alternate gene names: 89053128

Gene position: 610394-608514 (Counterclockwise)

Preceding gene: 89053129

Following gene: 89053127

Centisome position: 14.14

GC content: 60.71

Gene sequence:

>1881_bases
ATGGACGATCAGAACAGAAACCTGATCCTGGCCACCGGCCTGAGCTTTGTTGTCATCCTCGTATGGTTCCTCCTGTTCCC
GCCGCCAGAAATGGTGGAAGATCCCAATGCCATCCCCCCCGCGGCTGAAACCGGCGGCGTCGAAACCGATACCGGTATCG
CGTTGACCCCGCCTGTCACCGTCGCTGATGCGCCTGCGGGTGCGGACACCACGGCGCCGAGCGAGGTTGCGCTGTCGGAG
GCTGCGCGCATCGACATCGACACACCGGCGGTTGAGGGATCCATCTCGCTCCTGGGGGGCCGCATCGACGATCTGTCGCT
GCGCAACTACTTCACCGAAGTGGACGGCGACCAGATCGTCCGCCTCCTCTCGCCCGTGGGCTCCGATGACCCCTATTACG
CGCTCTACGGCTGGACCCCATCGGGGGATCTCGGTTACGCGGATGTGCCGACGTCCGACACGCCGTGGGAACTTGAATCC
GGCACAATTCTCACGCCCGACAGCCCCATCACGCTGGCCTGGGACAACGGATCTGGCCTGATCTTCCGCCGCACGATCGA
GATTGATGACCGCTTCATGTTCCAGGTCACGCAATCGGTCGAAAATACCGGCGGCGCGGAGGTCAACCTGGCCCCCTACG
GCATCGTGGCCCGTCACGGCCTGCCCTCGGATCTACAGAACTTCTTCATCCTGCACGAAGGCGTCGTTCGCAAAGTCGAC
GGAGAGCTGAGCGAGTTGGGCTACAGCGACCTTCCCGACCTGGACATCATCGCGCGCGAAGGCGTCCCGGCGGAGGTGAT
GGAGGTCGAGACCAACGGCTGGATCGGCTTCACCGACAAATACTGGATGACCACCCTGATCCCGGGCGAGAACCAATCCT
TCGTGTCAGTCGTCAAATACGTCCCCTCCGCCGAGATCTACCAGACCGAAGCGCGCCTGCCCTACATGTCCATCGCACCC
GGTGAAACGGCCGAGGTCACGACGCAGCTGTTCGCCGGTGCGAAAGAAGCCGAGGCGATCCGCGACTATGAAAACGCAGA
ACCCGGCCTGATCGCGAGCCTTTTTGGCGCCGAACAAGACGCCAGCCGCGGTGAGATCCCGCGCTTCATCGACAGCATCG
ACTGGGGGTGGTTCTACTTCCTCACCAAGCCGCTGTTCTGGCTTCTGCATTGGCTGAACGGTGCCATCGGCAATATGGGT
CTCGCGATCATCTCGCTCACCCTGATCGTGAAGGCCGTGCTCTTCCCGCTGGCCTACCGCTCCTATGTGTCGATGGCGAA
GATGAAAGAGCTTCAGCCAGAGATCGAGAAGCTGAAAGAAAGCGCGGGCGATGATCGCCAAAAGCTCCAGCAGGGCATGA
TGGAGCTGTACAAGAAGAACAAGGTGAACCCGGCGGGCGGCTGTTTGCCGATCCTGTTGCAGATCCCGATCTTCTTCTCG
CTCTACAAAGTGATTTTCGTCACGCTGGAGCTGCGCCACGCGCCGTTCTTCGGCTGGCTCAATGACCTCAGCGCCCCCGA
CAGCTCCTCGATCATCAACCTCTACGGCCTGCTACCCAACCCGGCGCCCGAGCCCGAATCGATCATGGCGCTGATCTTCA
TCGGCATTCTGCCCCTGCTTCTGGGCATCTCCATGTGGTTGCAGCAAAAGCTGAACCCGGCCCCAACGGACGCGATGCAG
GCGCAGATCTTCGCCTGGCTGCCCTGGGTCTTCATGTTCATGTTGGGCAGCTTCGCCTCCGGCCTTCTTGTCTACTGGAT
TGCCAACAACACGCTGACCTTCACACAGCAATACCTGATCATGCGCAGTCAGGGCTTTAAGCCCGACGTGTTCGGTAACA
TTCGCAGCAGCTTCAAGAAGAAGGCCAAGGAAGAGAAATGA

Upstream 100 bases:

>100_bases
CAACCCCCAGTCTGTTGAACCCGCAGGCACTGGGCACGCCGCGCAAGACTTGGTGTTTTCGCCTTATACGCAAGGACCCT
GACAGAGGAAGACCCCCAAC

Downstream 100 bases:

>100_bases
CCTGGGCCCTGGATCAGATCTGGCGCTATCCCATCAAGGGCATCGGGGCCGAGAGGCTTCGGGCGATTGATCTTGCGCCC
GGCCTGCCCCTGCCGCTGGA

Product: putative inner membrane protein translocase component YidC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 626; Mature: 626

Protein sequence:

>626_residues
MDDQNRNLILATGLSFVVILVWFLLFPPPEMVEDPNAIPPAAETGGVETDTGIALTPPVTVADAPAGADTTAPSEVALSE
AARIDIDTPAVEGSISLLGGRIDDLSLRNYFTEVDGDQIVRLLSPVGSDDPYYALYGWTPSGDLGYADVPTSDTPWELES
GTILTPDSPITLAWDNGSGLIFRRTIEIDDRFMFQVTQSVENTGGAEVNLAPYGIVARHGLPSDLQNFFILHEGVVRKVD
GELSELGYSDLPDLDIIAREGVPAEVMEVETNGWIGFTDKYWMTTLIPGENQSFVSVVKYVPSAEIYQTEARLPYMSIAP
GETAEVTTQLFAGAKEAEAIRDYENAEPGLIASLFGAEQDASRGEIPRFIDSIDWGWFYFLTKPLFWLLHWLNGAIGNMG
LAIISLTLIVKAVLFPLAYRSYVSMAKMKELQPEIEKLKESAGDDRQKLQQGMMELYKKNKVNPAGGCLPILLQIPIFFS
LYKVIFVTLELRHAPFFGWLNDLSAPDSSSIINLYGLLPNPAPEPESIMALIFIGILPLLLGISMWLQQKLNPAPTDAMQ
AQIFAWLPWVFMFMLGSFASGLLVYWIANNTLTFTQQYLIMRSQGFKPDVFGNIRSSFKKKAKEEK

Sequences:

>Translated_626_residues
MDDQNRNLILATGLSFVVILVWFLLFPPPEMVEDPNAIPPAAETGGVETDTGIALTPPVTVADAPAGADTTAPSEVALSE
AARIDIDTPAVEGSISLLGGRIDDLSLRNYFTEVDGDQIVRLLSPVGSDDPYYALYGWTPSGDLGYADVPTSDTPWELES
GTILTPDSPITLAWDNGSGLIFRRTIEIDDRFMFQVTQSVENTGGAEVNLAPYGIVARHGLPSDLQNFFILHEGVVRKVD
GELSELGYSDLPDLDIIAREGVPAEVMEVETNGWIGFTDKYWMTTLIPGENQSFVSVVKYVPSAEIYQTEARLPYMSIAP
GETAEVTTQLFAGAKEAEAIRDYENAEPGLIASLFGAEQDASRGEIPRFIDSIDWGWFYFLTKPLFWLLHWLNGAIGNMG
LAIISLTLIVKAVLFPLAYRSYVSMAKMKELQPEIEKLKESAGDDRQKLQQGMMELYKKNKVNPAGGCLPILLQIPIFFS
LYKVIFVTLELRHAPFFGWLNDLSAPDSSSIINLYGLLPNPAPEPESIMALIFIGILPLLLGISMWLQQKLNPAPTDAMQ
AQIFAWLPWVFMFMLGSFASGLLVYWIANNTLTFTQQYLIMRSQGFKPDVFGNIRSSFKKKAKEEK
>Mature_626_residues
MDDQNRNLILATGLSFVVILVWFLLFPPPEMVEDPNAIPPAAETGGVETDTGIALTPPVTVADAPAGADTTAPSEVALSE
AARIDIDTPAVEGSISLLGGRIDDLSLRNYFTEVDGDQIVRLLSPVGSDDPYYALYGWTPSGDLGYADVPTSDTPWELES
GTILTPDSPITLAWDNGSGLIFRRTIEIDDRFMFQVTQSVENTGGAEVNLAPYGIVARHGLPSDLQNFFILHEGVVRKVD
GELSELGYSDLPDLDIIAREGVPAEVMEVETNGWIGFTDKYWMTTLIPGENQSFVSVVKYVPSAEIYQTEARLPYMSIAP
GETAEVTTQLFAGAKEAEAIRDYENAEPGLIASLFGAEQDASRGEIPRFIDSIDWGWFYFLTKPLFWLLHWLNGAIGNMG
LAIISLTLIVKAVLFPLAYRSYVSMAKMKELQPEIEKLKESAGDDRQKLQQGMMELYKKNKVNPAGGCLPILLQIPIFFS
LYKVIFVTLELRHAPFFGWLNDLSAPDSSSIINLYGLLPNPAPEPESIMALIFIGILPLLLGISMWLQQKLNPAPTDAMQ
AQIFAWLPWVFMFMLGSFASGLLVYWIANNTLTFTQQYLIMRSQGFKPDVFGNIRSSFKKKAKEEK

Specific function: Required for the insertion of integral membrane proteins into the membrane. Probably plays an essential role in the integration of proteins of the respiratory chain complexes. Involved in integration of membrane proteins that insert dependently and indepe

COG id: COG0706

COG function: function code U; Preprotein translocase subunit YidC

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OXA1/oxaA family. Type 1 subfamily

Homologues:

Organism=Escherichia coli, GI1790140, Length=559, Percent_Identity=28.6225402504472, Blast_Score=212, Evalue=6e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): OXAA_JANSC (Q28UQ8)

Other databases:

- EMBL:   CP000264
- RefSeq:   YP_508579.1
- ProteinModelPortal:   Q28UQ8
- STRING:   Q28UQ8
- GeneID:   3933079
- GenomeReviews:   CP000264_GR
- KEGG:   jan:Jann_0637
- eggNOG:   COG0706
- HOGENOM:   HBG507812
- OMA:   FVTIEMR
- PhylomeDB:   Q28UQ8
- ProtClustDB:   PRK01318
- BioCyc:   JSP290400:JANN_0637-MONOMER
- HAMAP:   MF_01810
- InterPro:   IPR019998
- InterPro:   IPR001708
- PANTHER:   PTHR12428
- PRINTS:   PR00701
- PRINTS:   PR01900
- TIGRFAMs:   TIGR03593
- TIGRFAMs:   TIGR03592

Pfam domain/function: PF02096 60KD_IMP

EC number: NA

Molecular weight: Translated: 69110; Mature: 69110

Theoretical pI: Translated: 4.17; Mature: 4.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xce959f0)-; HASH(0xcf9ae58)-; HASH(0xe1620fc)-; HASH(0x95af584)-; HASH(0xdc43fec)-;

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDQNRNLILATGLSFVVILVWFLLFPPPEMVEDPNAIPPAAETGGVETDTGIALTPPVT
CCCCCCCEEEECHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCEEECCCCE
VADAPAGADTTAPSEVALSEAARIDIDTPAVEGSISLLGGRIDDLSLRNYFTEVDGDQIV
EECCCCCCCCCCCHHHHHHHHHEEECCCCCCCCCHHHHCCCCCCHHHHHHHHHCCHHHHH
RLLSPVGSDDPYYALYGWTPSGDLGYADVPTSDTPWELESGTILTPDSPITLAWDNGSGL
HHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEECCCEEECCCCCEEEEEECCCCE
IFRRTIEIDDRFMFQVTQSVENTGGAEVNLAPYGIVARHGLPSDLQNFFILHEGVVRKVD
EEEEEEECCCHHHHHHHHHHHCCCCCEEEECCCCEEECCCCCHHHHHHHHHHHHHHHHHC
GELSELGYSDLPDLDIIAREGVPAEVMEVETNGWIGFTDKYWMTTLIPGENQSFVSVVKY
CHHHHCCCCCCCCCCEEECCCCCCEEEEEECCCEEECCCCCEEEEEECCCCHHHHHHHHH
VPSAEIYQTEARLPYMSIAPGETAEVTTQLFAGAKEAEAIRDYENAEPGLIASLFGAEQD
CCCCHHEEHHCCCCEEEECCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHCCCCC
ASRGEIPRFIDSIDWGWFYFLTKPLFWLLHWLNGAIGNMGLAIISLTLIVKAVLFPLAYR
CCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SYVSMAKMKELQPEIEKLKESAGDDRQKLQQGMMELYKKNKVNPAGGCLPILLQIPIFFS
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
LYKVIFVTLELRHAPFFGWLNDLSAPDSSSIINLYGLLPNPAPEPESIMALIFIGILPLL
HHHHHHHHHHHCCCCCHHHHHHCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHH
LGISMWLQQKLNPAPTDAMQAQIFAWLPWVFMFMLGSFASGLLVYWIANNTLTFTQQYLI
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEEHHHHHHHH
MRSQGFKPDVFGNIRSSFKKKAKEEK
HHCCCCCCCHHHHHHHHHHHHHCCCH
>Mature Secondary Structure
MDDQNRNLILATGLSFVVILVWFLLFPPPEMVEDPNAIPPAAETGGVETDTGIALTPPVT
CCCCCCCEEEECHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCEEECCCCE
VADAPAGADTTAPSEVALSEAARIDIDTPAVEGSISLLGGRIDDLSLRNYFTEVDGDQIV
EECCCCCCCCCCCHHHHHHHHHEEECCCCCCCCCHHHHCCCCCCHHHHHHHHHCCHHHHH
RLLSPVGSDDPYYALYGWTPSGDLGYADVPTSDTPWELESGTILTPDSPITLAWDNGSGL
HHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEECCCEEECCCCCEEEEEECCCCE
IFRRTIEIDDRFMFQVTQSVENTGGAEVNLAPYGIVARHGLPSDLQNFFILHEGVVRKVD
EEEEEEECCCHHHHHHHHHHHCCCCCEEEECCCCEEECCCCCHHHHHHHHHHHHHHHHHC
GELSELGYSDLPDLDIIAREGVPAEVMEVETNGWIGFTDKYWMTTLIPGENQSFVSVVKY
CHHHHCCCCCCCCCCEEECCCCCCEEEEEECCCEEECCCCCEEEEEECCCCHHHHHHHHH
VPSAEIYQTEARLPYMSIAPGETAEVTTQLFAGAKEAEAIRDYENAEPGLIASLFGAEQD
CCCCHHEEHHCCCCEEEECCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHCCCCC
ASRGEIPRFIDSIDWGWFYFLTKPLFWLLHWLNGAIGNMGLAIISLTLIVKAVLFPLAYR
CCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SYVSMAKMKELQPEIEKLKESAGDDRQKLQQGMMELYKKNKVNPAGGCLPILLQIPIFFS
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
LYKVIFVTLELRHAPFFGWLNDLSAPDSSSIINLYGLLPNPAPEPESIMALIFIGILPLL
HHHHHHHHHHHCCCCCHHHHHHCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHH
LGISMWLQQKLNPAPTDAMQAQIFAWLPWVFMFMLGSFASGLLVYWIANNTLTFTQQYLI
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEEHHHHHHHH
MRSQGFKPDVFGNIRSSFKKKAKEEK
HHCCCCCCCHHHHHHHHHHHHHCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA