| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89053089
Identifier: 89053089
GI number: 89053089
Start: 580665
End: 581198
Strand: Direct
Name: 89053089
Synonym: Jann_0598
Alternate gene names: NA
Gene position: 580665-581198 (Clockwise)
Preceding gene: 89053088
Following gene: 89053090
Centisome position: 13.45
GC content: 60.49
Gene sequence:
>534_bases ATGAAACGTTTGCTGGCAGCGATTGCGGCCATCTTTGCGGGACCTGCGGCGGCCGATCCCATTGCAGAGGTTGAGGGATG GTTGCGAGAGCACCGGCCGGATTACTACGAGGGCCTGAACCCCGGCGTGGATGAGGCCGCCCTTGATGCGTTCGAGGCGC GATTTGACATCGTGCTGCCCGAGGCGTTCCGCAGATTGTATCTTTGGCGAGACGGGCATGGCGCATATCTGGCGCCGTCG CTGATCCACAACCTGATGTTTCCCCCACTGGCCTCTGTGGCGGATACCAAGGCGTTTCTCGATGATATGATCGGGTATGA TTTCCCCGACAGCGGCTTTTGGGAACGGCACTGGATCCCGTTCCTGGACAATGGCGGTGGCGATTACCTGACGATTGTGA CGGATGGGACGGCACAGGGCGGGGCGGTGATCATGTTCTATCATGACGACCCCTACCGCAGAGAGCGGGCGACCTCGTTT TCCCAGTGGCTGTCTGGGTTGCGTGCGGCTCTTGAGGACAGCACGGACGAGTAG
Upstream 100 bases:
>100_bases GACGTTGGGGGAGGGGGATTACCGCTATCTGTCGTTCTCGACCGAGGCCGTGGCGATCGAAATCCTGCGCAAGCCGAAGT GAGCCTGGGGGGACGCACAC
Downstream 100 bases:
>100_bases GCCACAGAGTGTTGCCGCAAAGGGGTTGCCTGTCACGCGAGAGGCTCCTATAGAGCGCACTCATTCACCGAACTCCATCA GAATCACGGTGACCCTGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 177; Mature: 177
Protein sequence:
>177_residues MKRLLAAIAAIFAGPAAADPIAEVEGWLREHRPDYYEGLNPGVDEAALDAFEARFDIVLPEAFRRLYLWRDGHGAYLAPS LIHNLMFPPLASVADTKAFLDDMIGYDFPDSGFWERHWIPFLDNGGGDYLTIVTDGTAQGGAVIMFYHDDPYRRERATSF SQWLSGLRAALEDSTDE
Sequences:
>Translated_177_residues MKRLLAAIAAIFAGPAAADPIAEVEGWLREHRPDYYEGLNPGVDEAALDAFEARFDIVLPEAFRRLYLWRDGHGAYLAPS LIHNLMFPPLASVADTKAFLDDMIGYDFPDSGFWERHWIPFLDNGGGDYLTIVTDGTAQGGAVIMFYHDDPYRRERATSF SQWLSGLRAALEDSTDE >Mature_177_residues MKRLLAAIAAIFAGPAAADPIAEVEGWLREHRPDYYEGLNPGVDEAALDAFEARFDIVLPEAFRRLYLWRDGHGAYLAPS LIHNLMFPPLASVADTKAFLDDMIGYDFPDSGFWERHWIPFLDNGGGDYLTIVTDGTAQGGAVIMFYHDDPYRRERATSF SQWLSGLRAALEDSTDE
Specific function: Unknown
COG id: COG4282
COG function: function code G; Protein involved in beta-1,3-glucan synthesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19801; Mature: 19801
Theoretical pI: Translated: 4.27; Mature: 4.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLLAAIAAIFAGPAAADPIAEVEGWLREHRPDYYEGLNPGVDEAALDAFEARFDIVLP CHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHCCCCCCCHHHHHHHHHHHHEECH EAFRRLYLWRDGHGAYLAPSLIHNLMFPPLASVADTKAFLDDMIGYDFPDSGFWERHWIP HHHHHHHHEECCCCCEEHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC FLDNGGGDYLTIVTDGTAQGGAVIMFYHDDPYRRERATSFSQWLSGLRAALEDSTDE EEECCCCCEEEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MKRLLAAIAAIFAGPAAADPIAEVEGWLREHRPDYYEGLNPGVDEAALDAFEARFDIVLP CHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHCCCCCCCHHHHHHHHHHHHEECH EAFRRLYLWRDGHGAYLAPSLIHNLMFPPLASVADTKAFLDDMIGYDFPDSGFWERHWIP HHHHHHHHEECCCCCEEHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC FLDNGGGDYLTIVTDGTAQGGAVIMFYHDDPYRRERATSFSQWLSGLRAALEDSTDE EEECCCCCEEEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA