| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89053017
Identifier: 89053017
GI number: 89053017
Start: 516727
End: 517344
Strand: Reverse
Name: 89053017
Synonym: Jann_0526
Alternate gene names: NA
Gene position: 517344-516727 (Counterclockwise)
Preceding gene: 89053019
Following gene: 89053014
Centisome position: 11.98
GC content: 61.97
Gene sequence:
>618_bases ATGTTCCCGGCTCTCCCCCTTCGTGCCCGCTGGACGGCCATGGTGATCGCGCTCGTCGCGGGTGGTTCTGTGCTGGTCAT GTTTTTCTACAATCTTGCAACCGACCGGTATGGAGATGAGGTCACGACGGCCTGGGCCATGGCGCGCTTCTTCACCATAC TCACGAACATTGCCGTGGCCTGGACGTTTCTGAACGCAGCGCTCCGACGTGACGGGGTCAGGCCCGCCTGGACCGCGGCC TTGACCTTGGCGATGGTCCTTGTCGGTGCAGTCTACCACACGCTCTTGTCGGGGATCACCACCTACGTGGGCTGGGGCGC ATGGGCGAACCATGGCTTGCATACATTCGTGCCGACGGCCTGCCTGTTGTGGTGGATCGCCTTTGCGCCCAAAAACAGAC TGCAGTTTCGCGATCTGCCAATGTTCATCGTCTGGCCCTGTGTCTATGTGGCCTACGCTCTGGCACGGGGGGCCCAGGAT GGGGTCTACCCCTACCCGTTCATGGATCTGGCCGAGAAGCCGCCACTGGTCGTCGCCACAAACCTGGCCGCTCTCCTCAC GGTGCTGCTGATCGGCGGTGTGATCTTTGTGATGGCCGCCCGCTTCGCAGACAGATAG
Upstream 100 bases:
>100_bases AGTCCATGGGACATGTATCGCGACTTGTAACCCACAGCGCACGGGAAAAACGCAGAGGCCGCGCTAGAAATGCGCACACA GCCGTGGCAATGAGCAGAGC
Downstream 100 bases:
>100_bases CCTGCATAGCTAGTCGAGGCCCGGCGCGTCCAGCAGATGCCGACCGGCGCGGTCCTCCACCTCAATCACCCAAAGGTCCG GGTCAAAACTTTGTTGCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 205; Mature: 205
Protein sequence:
>205_residues MFPALPLRARWTAMVIALVAGGSVLVMFFYNLATDRYGDEVTTAWAMARFFTILTNIAVAWTFLNAALRRDGVRPAWTAA LTLAMVLVGAVYHTLLSGITTYVGWGAWANHGLHTFVPTACLLWWIAFAPKNRLQFRDLPMFIVWPCVYVAYALARGAQD GVYPYPFMDLAEKPPLVVATNLAALLTVLLIGGVIFVMAARFADR
Sequences:
>Translated_205_residues MFPALPLRARWTAMVIALVAGGSVLVMFFYNLATDRYGDEVTTAWAMARFFTILTNIAVAWTFLNAALRRDGVRPAWTAA LTLAMVLVGAVYHTLLSGITTYVGWGAWANHGLHTFVPTACLLWWIAFAPKNRLQFRDLPMFIVWPCVYVAYALARGAQD GVYPYPFMDLAEKPPLVVATNLAALLTVLLIGGVIFVMAARFADR >Mature_205_residues MFPALPLRARWTAMVIALVAGGSVLVMFFYNLATDRYGDEVTTAWAMARFFTILTNIAVAWTFLNAALRRDGVRPAWTAA LTLAMVLVGAVYHTLLSGITTYVGWGAWANHGLHTFVPTACLLWWIAFAPKNRLQFRDLPMFIVWPCVYVAYALARGAQD GVYPYPFMDLAEKPPLVVATNLAALLTVLLIGGVIFVMAARFADR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22663; Mature: 22663
Theoretical pI: Translated: 9.64; Mature: 9.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFPALPLRARWTAMVIALVAGGSVLVMFFYNLATDRYGDEVTTAWAMARFFTILTNIAVA CCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH WTFLNAALRRDGVRPAWTAALTLAMVLVGAVYHTLLSGITTYVGWGAWANHGLHTFVPTA HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHH CLLWWIAFAPKNRLQFRDLPMFIVWPCVYVAYALARGAQDGVYPYPFMDLAEKPPLVVAT HHHHHHHHCCCCCCCHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCEEEHH NLAALLTVLLIGGVIFVMAARFADR HHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MFPALPLRARWTAMVIALVAGGSVLVMFFYNLATDRYGDEVTTAWAMARFFTILTNIAVA CCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH WTFLNAALRRDGVRPAWTAALTLAMVLVGAVYHTLLSGITTYVGWGAWANHGLHTFVPTA HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHH CLLWWIAFAPKNRLQFRDLPMFIVWPCVYVAYALARGAQDGVYPYPFMDLAEKPPLVVAT HHHHHHHHCCCCCCCHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCEEEHH NLAALLTVLLIGGVIFVMAARFADR HHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA