Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89053006

Identifier: 89053006

GI number: 89053006

Start: 509721

End: 510353

Strand: Direct

Name: 89053006

Synonym: Jann_0515

Alternate gene names: NA

Gene position: 509721-510353 (Clockwise)

Preceding gene: 89053005

Following gene: 89053007

Centisome position: 11.8

GC content: 64.45

Gene sequence:

>633_bases
GTGTTCAGACGCCGGGATTACAGACCGTGGTATCGCATCATTCTTGAGGTTCTCTGGCCTCGGGGGGGATGGCTGCGTGC
GGCCCAATACGTCCAGCACCGGATGCGCCGCCTGCCTGGAACGCCGGAGCAGATCGCGCGCGGGGTCTTTGCCGGGGCCG
TGACGGTCTTCACCCCCTACTTCGGCCTGCACTTCGTGATCGCGGCCCTGTTGGCGCGGGCGATGCGCGGGTCGATCTTC
GCCGCCCTGTTGGCGACGTTCATCGGCAACCCGTTGACCTATGTGCCGATCGCGGCGCTGTCTTTGAACCTTGGCCACTT
CATGCTGGGGTCCCGCCCGACCGTGGGCGTCAACGACAGCCTGTTCCGGCGATTTGGCGGGGCGTCCCGCGATTTGTGGC
ACAACATCAAGGCGCTGTTCACGCCCGAGCAGGCCCATTGGGGAGAGCTGCAGATCTTCTGGGACACGGTCATGTGGCCC
TGGACGGTTGGCGGCATTCTGCCCGGCCTTCTGTGCGGTACGATCTGCTATTTTCTGACCGTGCCCGTGGTGCGGGCCTA
CCAGAAAAGCCGTGCAGCCCGATTGCGGAAGAAGATGGACAAGCTGCGCAAGCAAGCGGAAGCGGCGGAGTGA

Upstream 100 bases:

>100_bases
GAGGCCCTAAGAGGTCCATATCTACGCAAGAGCGCCGGGATGGGACGACTGGCGCGAAGGGGCTGGCCCGCGACGGGCAG
TCAGAGGAGGCTCAACGCGC

Downstream 100 bases:

>100_bases
ACCCGCCCGACGGTGAAAGGATGAGCGCCATGGAGAAGCTGAGACTGGGTGTGAACATCGACCACGTCGCAACCCTGCGC
AATGCGCGAGGCGGGGCACT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MFRRRDYRPWYRIILEVLWPRGGWLRAAQYVQHRMRRLPGTPEQIARGVFAGAVTVFTPYFGLHFVIAALLARAMRGSIF
AALLATFIGNPLTYVPIAALSLNLGHFMLGSRPTVGVNDSLFRRFGGASRDLWHNIKALFTPEQAHWGELQIFWDTVMWP
WTVGGILPGLLCGTICYFLTVPVVRAYQKSRAARLRKKMDKLRKQAEAAE

Sequences:

>Translated_210_residues
MFRRRDYRPWYRIILEVLWPRGGWLRAAQYVQHRMRRLPGTPEQIARGVFAGAVTVFTPYFGLHFVIAALLARAMRGSIF
AALLATFIGNPLTYVPIAALSLNLGHFMLGSRPTVGVNDSLFRRFGGASRDLWHNIKALFTPEQAHWGELQIFWDTVMWP
WTVGGILPGLLCGTICYFLTVPVVRAYQKSRAARLRKKMDKLRKQAEAAE
>Mature_210_residues
MFRRRDYRPWYRIILEVLWPRGGWLRAAQYVQHRMRRLPGTPEQIARGVFAGAVTVFTPYFGLHFVIAALLARAMRGSIF
AALLATFIGNPLTYVPIAALSLNLGHFMLGSRPTVGVNDSLFRRFGGASRDLWHNIKALFTPEQAHWGELQIFWDTVMWP
WTVGGILPGLLCGTICYFLTVPVVRAYQKSRAARLRKKMDKLRKQAEAAE

Specific function: Unknown

COG id: COG3216

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23962; Mature: 23962

Theoretical pI: Translated: 11.54; Mature: 11.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRRRDYRPWYRIILEVLWPRGGWLRAAQYVQHRMRRLPGTPEQIARGVFAGAVTVFTPY
CCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
FGLHFVIAALLARAMRGSIFAALLATFIGNPLTYVPIAALSLNLGHFMLGSRPTVGVNDS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHH
LFRRFGGASRDLWHNIKALFTPEQAHWGELQIFWDTVMWPWTVGGILPGLLCGTICYFLT
HHHHHCCCCHHHHHHHHHHCCCCCCCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VPVVRAYQKSRAARLRKKMDKLRKQAEAAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFRRRDYRPWYRIILEVLWPRGGWLRAAQYVQHRMRRLPGTPEQIARGVFAGAVTVFTPY
CCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
FGLHFVIAALLARAMRGSIFAALLATFIGNPLTYVPIAALSLNLGHFMLGSRPTVGVNDS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHH
LFRRFGGASRDLWHNIKALFTPEQAHWGELQIFWDTVMWPWTVGGILPGLLCGTICYFLT
HHHHHCCCCHHHHHHHHHHCCCCCCCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VPVVRAYQKSRAARLRKKMDKLRKQAEAAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA