| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89053006
Identifier: 89053006
GI number: 89053006
Start: 509721
End: 510353
Strand: Direct
Name: 89053006
Synonym: Jann_0515
Alternate gene names: NA
Gene position: 509721-510353 (Clockwise)
Preceding gene: 89053005
Following gene: 89053007
Centisome position: 11.8
GC content: 64.45
Gene sequence:
>633_bases GTGTTCAGACGCCGGGATTACAGACCGTGGTATCGCATCATTCTTGAGGTTCTCTGGCCTCGGGGGGGATGGCTGCGTGC GGCCCAATACGTCCAGCACCGGATGCGCCGCCTGCCTGGAACGCCGGAGCAGATCGCGCGCGGGGTCTTTGCCGGGGCCG TGACGGTCTTCACCCCCTACTTCGGCCTGCACTTCGTGATCGCGGCCCTGTTGGCGCGGGCGATGCGCGGGTCGATCTTC GCCGCCCTGTTGGCGACGTTCATCGGCAACCCGTTGACCTATGTGCCGATCGCGGCGCTGTCTTTGAACCTTGGCCACTT CATGCTGGGGTCCCGCCCGACCGTGGGCGTCAACGACAGCCTGTTCCGGCGATTTGGCGGGGCGTCCCGCGATTTGTGGC ACAACATCAAGGCGCTGTTCACGCCCGAGCAGGCCCATTGGGGAGAGCTGCAGATCTTCTGGGACACGGTCATGTGGCCC TGGACGGTTGGCGGCATTCTGCCCGGCCTTCTGTGCGGTACGATCTGCTATTTTCTGACCGTGCCCGTGGTGCGGGCCTA CCAGAAAAGCCGTGCAGCCCGATTGCGGAAGAAGATGGACAAGCTGCGCAAGCAAGCGGAAGCGGCGGAGTGA
Upstream 100 bases:
>100_bases GAGGCCCTAAGAGGTCCATATCTACGCAAGAGCGCCGGGATGGGACGACTGGCGCGAAGGGGCTGGCCCGCGACGGGCAG TCAGAGGAGGCTCAACGCGC
Downstream 100 bases:
>100_bases ACCCGCCCGACGGTGAAAGGATGAGCGCCATGGAGAAGCTGAGACTGGGTGTGAACATCGACCACGTCGCAACCCTGCGC AATGCGCGAGGCGGGGCACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 210; Mature: 210
Protein sequence:
>210_residues MFRRRDYRPWYRIILEVLWPRGGWLRAAQYVQHRMRRLPGTPEQIARGVFAGAVTVFTPYFGLHFVIAALLARAMRGSIF AALLATFIGNPLTYVPIAALSLNLGHFMLGSRPTVGVNDSLFRRFGGASRDLWHNIKALFTPEQAHWGELQIFWDTVMWP WTVGGILPGLLCGTICYFLTVPVVRAYQKSRAARLRKKMDKLRKQAEAAE
Sequences:
>Translated_210_residues MFRRRDYRPWYRIILEVLWPRGGWLRAAQYVQHRMRRLPGTPEQIARGVFAGAVTVFTPYFGLHFVIAALLARAMRGSIF AALLATFIGNPLTYVPIAALSLNLGHFMLGSRPTVGVNDSLFRRFGGASRDLWHNIKALFTPEQAHWGELQIFWDTVMWP WTVGGILPGLLCGTICYFLTVPVVRAYQKSRAARLRKKMDKLRKQAEAAE >Mature_210_residues MFRRRDYRPWYRIILEVLWPRGGWLRAAQYVQHRMRRLPGTPEQIARGVFAGAVTVFTPYFGLHFVIAALLARAMRGSIF AALLATFIGNPLTYVPIAALSLNLGHFMLGSRPTVGVNDSLFRRFGGASRDLWHNIKALFTPEQAHWGELQIFWDTVMWP WTVGGILPGLLCGTICYFLTVPVVRAYQKSRAARLRKKMDKLRKQAEAAE
Specific function: Unknown
COG id: COG3216
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23962; Mature: 23962
Theoretical pI: Translated: 11.54; Mature: 11.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRRRDYRPWYRIILEVLWPRGGWLRAAQYVQHRMRRLPGTPEQIARGVFAGAVTVFTPY CCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH FGLHFVIAALLARAMRGSIFAALLATFIGNPLTYVPIAALSLNLGHFMLGSRPTVGVNDS HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHH LFRRFGGASRDLWHNIKALFTPEQAHWGELQIFWDTVMWPWTVGGILPGLLCGTICYFLT HHHHHCCCCHHHHHHHHHHCCCCCCCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH VPVVRAYQKSRAARLRKKMDKLRKQAEAAE HHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MFRRRDYRPWYRIILEVLWPRGGWLRAAQYVQHRMRRLPGTPEQIARGVFAGAVTVFTPY CCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH FGLHFVIAALLARAMRGSIFAALLATFIGNPLTYVPIAALSLNLGHFMLGSRPTVGVNDS HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHH LFRRFGGASRDLWHNIKALFTPEQAHWGELQIFWDTVMWPWTVGGILPGLLCGTICYFLT HHHHHCCCCHHHHHHHHHHCCCCCCCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH VPVVRAYQKSRAARLRKKMDKLRKQAEAAE HHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA