| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89053002
Identifier: 89053002
GI number: 89053002
Start: 505711
End: 506286
Strand: Reverse
Name: 89053002
Synonym: Jann_0511
Alternate gene names: NA
Gene position: 506286-505711 (Counterclockwise)
Preceding gene: 89053014
Following gene: 89053000
Centisome position: 11.73
GC content: 57.47
Gene sequence:
>576_bases ATGTTTTACCGAGACGAACGTCTTGCGCTGTTTATCGACGGCTCCAACCTCTATGCGGCGGCAAAGGCGCTGGGGTTTGA CATCGATTACAAACTTTTGCGGTCAGAATTCATGCAGCGCGGCAAATTACTGCGGGCGAACTATTATACCGCGCTTTTGG AAAATGATGACTATTCCCCGATCCGGCCGCTGGTCGATTGGCTGCATTACAACGGCTTCAACATGGTCACGAAACCCGCC AAGGAATTCGTGGACAGCCAGGGTCGCCGCAAGGTGAAGGGGAACATGGATATCGAACTGGCCGTCGACGCGATGGAAAC CGCGCCCCATGTCGACCACATCGTGATCTTCTCCGGCGATGGTGACTTCCGTCCGCTGGTCGAATCGCTGCAACGCAAGG GATGCCGGGTATCCGTCGTCTCCACGATCCGCAGCCAACCGCCGATGATCGCCGACGACCTGCGCCGCCAATGCGATAAT TTTATCGAACTTCTGGACCTCAAAGAGGCCATTGGCCGTCCCCCACGGGAACCCCGGCCCGAGCCGTCGGCCCAGATCGA AGTGGTTGCCGACTAA
Upstream 100 bases:
>100_bases TTACATACAAACTTGCCAGCTCGCACTGGAGGCCGCCGGATGGGACCGGAATTTTTAGGCCAACGGTGCAATACACTCAC TCACGGGCATTGGATACAAC
Downstream 100 bases:
>100_bases AGACCTGACGGATGGTCCCCGGCGCGAGTCGCTTGGCCGAGCGTCCATAGGCCAGCGGCGGCAAGCATCATCGCGACCCC GGATGCCAGCGTCCGGGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 191; Mature: 191
Protein sequence:
>191_residues MFYRDERLALFIDGSNLYAAAKALGFDIDYKLLRSEFMQRGKLLRANYYTALLENDDYSPIRPLVDWLHYNGFNMVTKPA KEFVDSQGRRKVKGNMDIELAVDAMETAPHVDHIVIFSGDGDFRPLVESLQRKGCRVSVVSTIRSQPPMIADDLRRQCDN FIELLDLKEAIGRPPREPRPEPSAQIEVVAD
Sequences:
>Translated_191_residues MFYRDERLALFIDGSNLYAAAKALGFDIDYKLLRSEFMQRGKLLRANYYTALLENDDYSPIRPLVDWLHYNGFNMVTKPA KEFVDSQGRRKVKGNMDIELAVDAMETAPHVDHIVIFSGDGDFRPLVESLQRKGCRVSVVSTIRSQPPMIADDLRRQCDN FIELLDLKEAIGRPPREPRPEPSAQIEVVAD >Mature_191_residues MFYRDERLALFIDGSNLYAAAKALGFDIDYKLLRSEFMQRGKLLRANYYTALLENDDYSPIRPLVDWLHYNGFNMVTKPA KEFVDSQGRRKVKGNMDIELAVDAMETAPHVDHIVIFSGDGDFRPLVESLQRKGCRVSVVSTIRSQPPMIADDLRRQCDN FIELLDLKEAIGRPPREPRPEPSAQIEVVAD
Specific function: Unknown
COG id: COG1432
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21834; Mature: 21834
Theoretical pI: Translated: 5.37; Mature: 5.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFYRDERLALFIDGSNLYAAAKALGFDIDYKLLRSEFMQRGKLLRANYYTALLENDDYSP CCCCCCEEEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHCCCEEECHHEEEEECCCCCCH IRPLVDWLHYNGFNMVTKPAKEFVDSQGRRKVKGNMDIELAVDAMETAPHVDHIVIFSGD HHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEECCCCCEEEEEEHHHCCCCCCEEEEECCC GDFRPLVESLQRKGCRVSVVSTIRSQPPMIADDLRRQCDNFIELLDLKEAIGRPPREPRP CCHHHHHHHHHHCCCEEEEHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC EPSAQIEVVAD CCCCCEEEEEC >Mature Secondary Structure MFYRDERLALFIDGSNLYAAAKALGFDIDYKLLRSEFMQRGKLLRANYYTALLENDDYSP CCCCCCEEEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHCCCEEECHHEEEEECCCCCCH IRPLVDWLHYNGFNMVTKPAKEFVDSQGRRKVKGNMDIELAVDAMETAPHVDHIVIFSGD HHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEECCCCCEEEEEEHHHCCCCCCEEEEECCC GDFRPLVESLQRKGCRVSVVSTIRSQPPMIADDLRRQCDNFIELLDLKEAIGRPPREPRP CCHHHHHHHHHHCCCEEEEHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC EPSAQIEVVAD CCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA