| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is pyk [H]
Identifier: 89052938
GI number: 89052938
Start: 450520
End: 451968
Strand: Direct
Name: pyk [H]
Synonym: Jann_0447
Alternate gene names: 89052938
Gene position: 450520-451968 (Clockwise)
Preceding gene: 89052935
Following gene: 89052939
Centisome position: 10.43
GC content: 61.97
Gene sequence:
>1449_bases ATGAAACGCGACCGTAACGTCAAGATCGTTGCAACCCTCGGCCCCGCGTCCGATGACTATGAGATGATCCGGGCGCTCCA TGAGGCCGGTGCAGACGTGTTTCGCCTAAATATGTCTCATGGGGACCATTCCGAGATTGCCGTGCGCCACGGTATCATTC GCCAGATTGAGGCCGATCTGGGTCAACCGATTGCCATTCTGGCAGATTTGCAGGGTCCCAAGCTGCGCGTCGGCGTCTTT GACAACGATGACGGCTACGATCTGGACGTTGGCGCGACATTCCGCATGGACCTCGATGACACGCCTGGCGACACCACCCG CGTGCAACTGCCCCACACCGAGATTTTCGCGGCTCTGGAGCCCGGCGCGCATCTGCTGATCAACGATGGCAAGATCCGGG TGAAGGTGCTGGAGTGCGGTACGGATTATGCCAATTGCGAAGTCCTCGCGGGTGGGCGGATTTCCAACCGCAAGGGCGTG AACGTGCCGGACGTTGTTCTGCCGCTTGCCGCGCTCTCAGAGAAGGATCGCAAGGACCTGGAATTTGTTTGTGAGTTGGG GGTCGACTGGTTGGCGCTGTCGTTTGTGCAGCGCCGCGAGGATGTGGACGAAGCGCGGAGCCTGGCCAAGGGCCGCGCGG CGGTTCTGTCGAAGATCGAGAAGCCGTCTGCCGTAGCGAACTTCGGTGAAATCCTGGAGGCGTCCGACGGCATCATGGTC GCGCGTGGCGATCTGGGTGTGGAGCTGCCCGTGCAGAACGTGCCGCCGATCCAGAAGCTTCTGGTGCGCAAGTGCCGCAA CGCGGCCAAGCCGGTGATCGTTGCCACGCAAATGCTGGAGAGCATGATTGAAAGCCCGATGCCCACCCGCGCCGAGGTCT CGGACGTGGCTGCCGCGATCTATGAAGGCGCCGATGCCATCATGCTCAGCGCCGAATCTGCCGCCGGTGATTTTCCGATT GAGGCCGTGACCACGATGAACAACGTCGCCGTGGAGGTTGAAAGTGACCCCACCTACCGCAGCATCATCGAGGCCAGCCG CGGCGGCGAGAAGGAGACGGTTGCCGATGCCATCGTATCTGCCGCGCGCGAAATCGCGGAGACGACCAACATCAAGTTGA TCTGTTGCTTCTCGGAATCCGGCTCCACCGCCGCGCTCACGGCGCGTGAGCGGCCAAATGTGCCGATCCTCGCCCTGACC TCGCGCCAGGCCACGGCGCGGCGGATGTGCCTGACCTGGGGTTGCCATTGTGTGAAGGTCGGTTCGGTCGGACGTTTCAA GGAAGCGGTGATCAGCGCCGTGCGCGCGGCCACCACGGAAGGGCTGGCAGAAACGACAGATCAGATCGTCGTGACCGCGG GTGTGCCGTTTGGTCAATCGGGCTCCACCAACATTCTGCGGATTGCACCCTGCGATGAGCGGTTGATTTACGCGTCCGAG CTGGAATGA
Upstream 100 bases:
>100_bases CAATAGAGGTGCAACGGCGCGACTGATAGCGCAAACATCGTCGTAAATGCGCGATGATCCCGATACCCAAGACCCAGACT GGCAAGAGGATGACAGATCC
Downstream 100 bases:
>100_bases CCCTGCCGGTCGGCGCAGACATCCTTCTGGTGATCGCCACCGTGGTCGGGATCTTGTCGCTCTCGTCCATTGTGGCCGCT TGGACGATCAAACGCTGGCC
Product: pyruvate kinase
Products: NA
Alternate protein names: PK [H]
Number of amino acids: Translated: 482; Mature: 482
Protein sequence:
>482_residues MKRDRNVKIVATLGPASDDYEMIRALHEAGADVFRLNMSHGDHSEIAVRHGIIRQIEADLGQPIAILADLQGPKLRVGVF DNDDGYDLDVGATFRMDLDDTPGDTTRVQLPHTEIFAALEPGAHLLINDGKIRVKVLECGTDYANCEVLAGGRISNRKGV NVPDVVLPLAALSEKDRKDLEFVCELGVDWLALSFVQRREDVDEARSLAKGRAAVLSKIEKPSAVANFGEILEASDGIMV ARGDLGVELPVQNVPPIQKLLVRKCRNAAKPVIVATQMLESMIESPMPTRAEVSDVAAAIYEGADAIMLSAESAAGDFPI EAVTTMNNVAVEVESDPTYRSIIEASRGGEKETVADAIVSAAREIAETTNIKLICCFSESGSTAALTARERPNVPILALT SRQATARRMCLTWGCHCVKVGSVGRFKEAVISAVRAATTEGLAETTDQIVVTAGVPFGQSGSTNILRIAPCDERLIYASE LE
Sequences:
>Translated_482_residues MKRDRNVKIVATLGPASDDYEMIRALHEAGADVFRLNMSHGDHSEIAVRHGIIRQIEADLGQPIAILADLQGPKLRVGVF DNDDGYDLDVGATFRMDLDDTPGDTTRVQLPHTEIFAALEPGAHLLINDGKIRVKVLECGTDYANCEVLAGGRISNRKGV NVPDVVLPLAALSEKDRKDLEFVCELGVDWLALSFVQRREDVDEARSLAKGRAAVLSKIEKPSAVANFGEILEASDGIMV ARGDLGVELPVQNVPPIQKLLVRKCRNAAKPVIVATQMLESMIESPMPTRAEVSDVAAAIYEGADAIMLSAESAAGDFPI EAVTTMNNVAVEVESDPTYRSIIEASRGGEKETVADAIVSAAREIAETTNIKLICCFSESGSTAALTARERPNVPILALT SRQATARRMCLTWGCHCVKVGSVGRFKEAVISAVRAATTEGLAETTDQIVVTAGVPFGQSGSTNILRIAPCDERLIYASE LE >Mature_482_residues MKRDRNVKIVATLGPASDDYEMIRALHEAGADVFRLNMSHGDHSEIAVRHGIIRQIEADLGQPIAILADLQGPKLRVGVF DNDDGYDLDVGATFRMDLDDTPGDTTRVQLPHTEIFAALEPGAHLLINDGKIRVKVLECGTDYANCEVLAGGRISNRKGV NVPDVVLPLAALSEKDRKDLEFVCELGVDWLALSFVQRREDVDEARSLAKGRAAVLSKIEKPSAVANFGEILEASDGIMV ARGDLGVELPVQNVPPIQKLLVRKCRNAAKPVIVATQMLESMIESPMPTRAEVSDVAAAIYEGADAIMLSAESAAGDFPI EAVTTMNNVAVEVESDPTYRSIIEASRGGEKETVADAIVSAAREIAETTNIKLICCFSESGSTAALTARERPNVPILALT SRQATARRMCLTWGCHCVKVGSVGRFKEAVISAVRAATTEGLAETTDQIVVTAGVPFGQSGSTNILRIAPCDERLIYASE LE
Specific function: Glycolysis; final step. [C]
COG id: COG0469
COG function: function code G; Pyruvate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pyruvate kinase family [H]
Homologues:
Organism=Homo sapiens, GI33286422, Length=490, Percent_Identity=37.7551020408163, Blast_Score=282, Evalue=5e-76, Organism=Homo sapiens, GI33286420, Length=490, Percent_Identity=37.7551020408163, Blast_Score=282, Evalue=5e-76, Organism=Homo sapiens, GI33286418, Length=488, Percent_Identity=37.7049180327869, Blast_Score=276, Evalue=3e-74, Organism=Homo sapiens, GI32967597, Length=489, Percent_Identity=35.9918200408998, Blast_Score=257, Evalue=2e-68, Organism=Homo sapiens, GI10835121, Length=489, Percent_Identity=35.9918200408998, Blast_Score=257, Evalue=2e-68, Organism=Homo sapiens, GI310128732, Length=287, Percent_Identity=38.3275261324042, Blast_Score=180, Evalue=3e-45, Organism=Homo sapiens, GI310128730, Length=287, Percent_Identity=38.3275261324042, Blast_Score=180, Evalue=3e-45, Organism=Homo sapiens, GI310128736, Length=235, Percent_Identity=33.6170212765957, Blast_Score=122, Evalue=8e-28, Organism=Homo sapiens, GI310128734, Length=235, Percent_Identity=33.6170212765957, Blast_Score=122, Evalue=8e-28, Organism=Homo sapiens, GI310128738, Length=212, Percent_Identity=33.0188679245283, Blast_Score=103, Evalue=4e-22, Organism=Escherichia coli, GI1787965, Length=467, Percent_Identity=39.186295503212, Blast_Score=303, Evalue=1e-83, Organism=Escherichia coli, GI1788160, Length=478, Percent_Identity=38.9121338912134, Blast_Score=286, Evalue=3e-78, Organism=Caenorhabditis elegans, GI17544584, Length=489, Percent_Identity=35.9918200408998, Blast_Score=276, Evalue=1e-74, Organism=Caenorhabditis elegans, GI71984406, Length=482, Percent_Identity=35.0622406639004, Blast_Score=239, Evalue=2e-63, Organism=Caenorhabditis elegans, GI71984413, Length=482, Percent_Identity=35.0622406639004, Blast_Score=239, Evalue=2e-63, Organism=Caenorhabditis elegans, GI17506831, Length=482, Percent_Identity=35.0622406639004, Blast_Score=239, Evalue=2e-63, Organism=Caenorhabditis elegans, GI17506829, Length=482, Percent_Identity=35.0622406639004, Blast_Score=239, Evalue=2e-63, Organism=Saccharomyces cerevisiae, GI6324923, Length=483, Percent_Identity=34.9896480331263, Blast_Score=243, Evalue=5e-65, Organism=Saccharomyces cerevisiae, GI6319279, Length=420, Percent_Identity=37.1428571428571, Blast_Score=241, Evalue=2e-64, Organism=Drosophila melanogaster, GI28571814, Length=481, Percent_Identity=36.7983367983368, Blast_Score=267, Evalue=1e-71, Organism=Drosophila melanogaster, GI24648964, Length=481, Percent_Identity=36.7983367983368, Blast_Score=266, Evalue=2e-71, Organism=Drosophila melanogaster, GI24581235, Length=426, Percent_Identity=35.9154929577465, Blast_Score=240, Evalue=1e-63, Organism=Drosophila melanogaster, GI24648966, Length=400, Percent_Identity=35, Blast_Score=222, Evalue=4e-58, Organism=Drosophila melanogaster, GI24646914, Length=249, Percent_Identity=37.7510040160643, Blast_Score=151, Evalue=1e-36,
Paralogues:
None
Copy number: 500 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 124 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001697 - InterPro: IPR015813 - InterPro: IPR011037 - InterPro: IPR015794 - InterPro: IPR018209 - InterPro: IPR015793 - InterPro: IPR015795 - InterPro: IPR015806 [H]
Pfam domain/function: PF00224 PK; PF02887 PK_C [H]
EC number: =2.7.1.40 [H]
Molecular weight: Translated: 51743; Mature: 51743
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: PS00110 PYRUVATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRDRNVKIVATLGPASDDYEMIRALHEAGADVFRLNMSHGDHSEIAVRHGIIRQIEADL CCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHC GQPIAILADLQGPKLRVGVFDNDDGYDLDVGATFRMDLDDTPGDTTRVQLPHTEIFAALE CCCEEEEEECCCCEEEEEEEECCCCEEEECCCEEEECCCCCCCCCEEEECCHHHEEEEEC PGAHLLINDGKIRVKVLECGTDYANCEVLAGGRISNRKGVNVPDVVLPLAALSEKDRKDL CCCEEEEECCEEEEEEEECCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCHHHH EFVCELGVDWLALSFVQRREDVDEARSLAKGRAAVLSKIEKPSAVANFGEILEASDGIMV HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEE ARGDLGVELPVQNVPPIQKLLVRKCRNAAKPVIVATQMLESMIESPMPTRAEVSDVAAAI EECCCCEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH YEGADAIMLSAESAAGDFPIEAVTTMNNVAVEVESDPTYRSIIEASRGGEKETVADAIVS HCCCCEEEEEECCCCCCCCCCEEEECCEEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHH AAREIAETTNIKLICCFSESGSTAALTARERPNVPILALTSRQATARRMCLTWGCHCVKV HHHHHHHHCCEEEEEEECCCCCEEEEEECCCCCCCEEEEECCCHHHHHHHHHHCCEEEEE GSVGRFKEAVISAVRAATTEGLAETTDQIVVTAGVPFGQSGSTNILRIAPCDERLIYASE CCCCHHHHHHHHHHHHHHHCCHHHCCCCEEEEECCCCCCCCCCCEEEEECCCCCEEEEEC LE CC >Mature Secondary Structure MKRDRNVKIVATLGPASDDYEMIRALHEAGADVFRLNMSHGDHSEIAVRHGIIRQIEADL CCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHC GQPIAILADLQGPKLRVGVFDNDDGYDLDVGATFRMDLDDTPGDTTRVQLPHTEIFAALE CCCEEEEEECCCCEEEEEEEECCCCEEEECCCEEEECCCCCCCCCEEEECCHHHEEEEEC PGAHLLINDGKIRVKVLECGTDYANCEVLAGGRISNRKGVNVPDVVLPLAALSEKDRKDL CCCEEEEECCEEEEEEEECCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCHHHH EFVCELGVDWLALSFVQRREDVDEARSLAKGRAAVLSKIEKPSAVANFGEILEASDGIMV HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEE ARGDLGVELPVQNVPPIQKLLVRKCRNAAKPVIVATQMLESMIESPMPTRAEVSDVAAAI EECCCCEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH YEGADAIMLSAESAAGDFPIEAVTTMNNVAVEVESDPTYRSIIEASRGGEKETVADAIVS HCCCCEEEEEECCCCCCCCCCEEEECCEEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHH AAREIAETTNIKLICCFSESGSTAALTARERPNVPILALTSRQATARRMCLTWGCHCVKV HHHHHHHHCCEEEEEEECCCCCEEEEEECCCCCCCEEEEECCCHHHHHHHHHHCCEEEEE GSVGRFKEAVISAVRAATTEGLAETTDQIVVTAGVPFGQSGSTNILRIAPCDERLIYASE CCCCHHHHHHHHHHHHHHHCCHHHCCCCEEEEECCCCCCCCCCCEEEEECCCCCEEEEEC LE CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA