Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89052901

Identifier: 89052901

GI number: 89052901

Start: 412521

End: 413003

Strand: Reverse

Name: 89052901

Synonym: Jann_0410

Alternate gene names: NA

Gene position: 413003-412521 (Counterclockwise)

Preceding gene: 89052902

Following gene: 89052900

Centisome position: 9.56

GC content: 61.08

Gene sequence:

>483_bases
ATGTCGTTATTTAGACGCAGAACTCTGTTGGTCTTGCTCAGCGCATTGCCGCTGGCCGCGTGCAATTTCCAGCCGGTCTA
TGGGCCGGGCGGATCTGGCGACATCATTCGTGATCAGATCCGGGTGGCCGAACCCAATTCCAGGTTGGAGTTTGAGCTAG
TCTCCCGCCTGGAAGATCGCCTTGGCGCCGGGTCCAGCTACGCGCTGAACTACAGCGTCTCTGTTGCGACCCGGAACCTC
GCGATTGACGAGACGGCGGTGATCAACCGCGTCAACCTTGTGGGCAACCTCAATTTCAATGTGACGGAGGTCGGAACGGG
GCGGAACGTCCAGACCGCCACGGTGTCGACGTTCACCTCTTACGCCACAACGGAATCGCCAGTGGCCACCGAATCCGCGC
GCCGCGATGCGGAGGATCGTTTGGCGGTCGCCTTGGCCGATCAAATGGTCACGCGCCTCATCGCCGGGGCGCAATCCTGG
TGA

Upstream 100 bases:

>100_bases
GAAGAGGTTGAAAAACGCGCGCTTGCAGACGACGCTGTGGTCAGGGCGTTGGATGGGGCCGCGCCGAAAAAGCTGATCGT
TGTCCCCGGACGGATCGTGA

Downstream 100 bases:

>100_bases
AGATCTTTCGATGAAGCTCTCCACCCGCGATGCAAACGTCTATTTCAAGCGGCCCGATACCTCTGCCGCCGGGTGCCTGA
TTTTCGGCGACGACGCCATG

Product: putative lipoprotein

Products: NA

Alternate protein names: Lipoprotein

Number of amino acids: Translated: 160; Mature: 159

Protein sequence:

>160_residues
MSLFRRRTLLVLLSALPLAACNFQPVYGPGGSGDIIRDQIRVAEPNSRLEFELVSRLEDRLGAGSSYALNYSVSVATRNL
AIDETAVINRVNLVGNLNFNVTEVGTGRNVQTATVSTFTSYATTESPVATESARRDAEDRLAVALADQMVTRLIAGAQSW

Sequences:

>Translated_160_residues
MSLFRRRTLLVLLSALPLAACNFQPVYGPGGSGDIIRDQIRVAEPNSRLEFELVSRLEDRLGAGSSYALNYSVSVATRNL
AIDETAVINRVNLVGNLNFNVTEVGTGRNVQTATVSTFTSYATTESPVATESARRDAEDRLAVALADQMVTRLIAGAQSW
>Mature_159_residues
SLFRRRTLLVLLSALPLAACNFQPVYGPGGSGDIIRDQIRVAEPNSRLEFELVSRLEDRLGAGSSYALNYSVSVATRNLA
IDETAVINRVNLVGNLNFNVTEVGTGRNVQTATVSTFTSYATTESPVATESARRDAEDRLAVALADQMVTRLIAGAQSW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17293; Mature: 17162

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLFRRRTLLVLLSALPLAACNFQPVYGPGGSGDIIRDQIRVAEPNSRLEFELVSRLEDR
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECEEEEECCCCCHHHHHHHHHHHH
LGAGSSYALNYSVSVATRNLAIDETAVINRVNLVGNLNFNVTEVGTGRNVQTATVSTFTS
HCCCCCEEEEEEEEEEECCEECCHHHHHEEEEEEEECCCEEEECCCCCCEEEEEHHHHHH
YATTESPVATESARRDAEDRLAVALADQMVTRLIAGAQSW
HCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SLFRRRTLLVLLSALPLAACNFQPVYGPGGSGDIIRDQIRVAEPNSRLEFELVSRLEDR
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECEEEEECCCCCHHHHHHHHHHHH
LGAGSSYALNYSVSVATRNLAIDETAVINRVNLVGNLNFNVTEVGTGRNVQTATVSTFTS
HCCCCCEEEEEEEEEEECCEECCHHHHHEEEEEEEECCCEEEECCCCCCEEEEEHHHHHH
YATTESPVATESARRDAEDRLAVALADQMVTRLIAGAQSW
HCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA