Click here to switch to the map view.

The map label for this gene is 89052900

Identifier: 89052900

GI number: 89052900

Start: 411479

End: 412510

Strand: Reverse

Name: 89052900

Synonym: Jann_0409

Alternate gene names: NA

Gene position: 412510-411479 (Counterclockwise)

Preceding gene: 89052901

Following gene: 89052899

Centisome position: 9.55

GC content: 65.41

Gene sequence:

>1032_bases
ATGAAGCTCTCCACCCGCGATGCAAACGTCTATTTCAAGCGGCCCGATACCTCTGCCGCCGGGTGCCTGATTTTCGGCGA
CGACGCCATGCGCGTGGCCCTGAAACGACAGGACCTTCTGGCGGCTTTGCTTGGGGCAGCCGCGGAAGAGGAGATGCGCC
TGACCCGCATGACCGGCGCGGATCTGCGGTCCGACAGTGCCGGGCTTCTGGATGCCGTGAAGGCCGTGGGCTTTTTTCCG
GGGCCGAGGGCGGTGCTGGTGGAAGGGGCGACCGATGGCTTGGCGAAGGTTTTTACCGCCGCGTTTGAAGAATGGCAGGA
CGGCGATGCCCAGATCATTGCCACCGCCGGCCGGCTGACCGCCAAATCAGCCCTGCGCAAGGTGTTTGAGGGCAACAAGC
GCGCCTATGCCGCCGCGATTTATGATGATCCACCGGGCCGCGCCGAGATTGAGGATATGCTGAAAGCCGCCGGGATCACC
AACACGGATCGGGAGGCGATGGTTGATCTGGAGGGGCTCGCGCGGTCCATCGGTCCGGGGGATTTCCGGCAGATGGTGGA
CAAGCTAGGGCTGTATAAACGCGGCGACGCGACGCCTGTGCTGCCCGCCGATATCGAAGCCGTCGCGCCCCTGACGCGGG
AGGCCGAGCTGGACGATATCTTGCATGCAACAGCGGAGGCCGAGACTGGCGCAATTGGCCCCATCCTCGTACGTTTGAAA
CAGCAGGGAACGACGCCCGTCTCCCTTTGTATCGCCGCGTTGCGCCACTTTCGCGCGCTCCATTCCGCCGCCGCCCATCC
CGATGGCCCCGCCGCCGGGTTGCAAGCCATGCGCCCGCCCGTGTTCGGACCGCGCCGGGACCGTATGGCACGACAGGCCA
GCCGCTGGGGGCAAAGCGCGCTGGAAGCCGCGCTGTCGATGCTGGTCGAGACGGATCTGACGCTGAGATCCGCCAGCACC
GCGCCACAAATGGCGGTGATGGAGCGGACGTTAATCAGGCTGGCGATGCTGCCGGGGAGAGGACGACGATGA

Upstream 100 bases:

>100_bases
TCCGCGCGCCGCGATGCGGAGGATCGTTTGGCGGTCGCCTTGGCCGATCAAATGGTCACGCGCCTCATCGCCGGGGCGCA
ATCCTGGTGAAGATCTTTCG

Downstream 100 bases:

>100_bases
GTGAATATGTGGTGTTTGGCGGCGCACGATCCCGCGCGATGCGAGTGTTATGGATGCTGGAGGAGTTGGGGCTGGATTAC
GCCGTCGTGCCCACCCTGCC

Product: DNA polymerase III subunit delta

Products: diphosphate; DNAn+1

Alternate protein names: DNA Polymerase III Subunit Delta; DNA Polymerase III Delta; DNA Polymerase II

Number of amino acids: Translated: 343; Mature: 343

Protein sequence:

>343_residues
MKLSTRDANVYFKRPDTSAAGCLIFGDDAMRVALKRQDLLAALLGAAAEEEMRLTRMTGADLRSDSAGLLDAVKAVGFFP
GPRAVLVEGATDGLAKVFTAAFEEWQDGDAQIIATAGRLTAKSALRKVFEGNKRAYAAAIYDDPPGRAEIEDMLKAAGIT
NTDREAMVDLEGLARSIGPGDFRQMVDKLGLYKRGDATPVLPADIEAVAPLTREAELDDILHATAEAETGAIGPILVRLK
QQGTTPVSLCIAALRHFRALHSAAAHPDGPAAGLQAMRPPVFGPRRDRMARQASRWGQSALEAALSMLVETDLTLRSAST
APQMAVMERTLIRLAMLPGRGRR

Sequences:

>Translated_343_residues
MKLSTRDANVYFKRPDTSAAGCLIFGDDAMRVALKRQDLLAALLGAAAEEEMRLTRMTGADLRSDSAGLLDAVKAVGFFP
GPRAVLVEGATDGLAKVFTAAFEEWQDGDAQIIATAGRLTAKSALRKVFEGNKRAYAAAIYDDPPGRAEIEDMLKAAGIT
NTDREAMVDLEGLARSIGPGDFRQMVDKLGLYKRGDATPVLPADIEAVAPLTREAELDDILHATAEAETGAIGPILVRLK
QQGTTPVSLCIAALRHFRALHSAAAHPDGPAAGLQAMRPPVFGPRRDRMARQASRWGQSALEAALSMLVETDLTLRSAST
APQMAVMERTLIRLAMLPGRGRR
>Mature_343_residues
MKLSTRDANVYFKRPDTSAAGCLIFGDDAMRVALKRQDLLAALLGAAAEEEMRLTRMTGADLRSDSAGLLDAVKAVGFFP
GPRAVLVEGATDGLAKVFTAAFEEWQDGDAQIIATAGRLTAKSALRKVFEGNKRAYAAAIYDDPPGRAEIEDMLKAAGIT
NTDREAMVDLEGLARSIGPGDFRQMVDKLGLYKRGDATPVLPADIEAVAPLTREAELDDILHATAEAETGAIGPILVRLK
QQGTTPVSLCIAALRHFRALHSAAAHPDGPAAGLQAMRPPVFGPRRDRMARQASRWGQSALEAALSMLVETDLTLRSAST
APQMAVMERTLIRLAMLPGRGRR

Specific function: Unknown

COG id: COG1466

COG function: function code L; DNA polymerase III, delta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.7.7

Molecular weight: Translated: 36687; Mature: 36687

Theoretical pI: Translated: 7.58; Mature: 7.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLSTRDANVYFKRPDTSAAGCLIFGDDAMRVALKRQDLLAALLGAAAEEEMRLTRMTGA
CCCCCCCCEEEEECCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DLRSDSAGLLDAVKAVGFFPGPRAVLVEGATDGLAKVFTAAFEEWQDGDAQIIATAGRLT
CCCCCCHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEECHHHH
AKSALRKVFEGNKRAYAAAIYDDPPGRAEIEDMLKAAGITNTDREAMVDLEGLARSIGPG
HHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCH
DFRQMVDKLGLYKRGDATPVLPADIEAVAPLTREAELDDILHATAEAETGAIGPILVRLK
HHHHHHHHHCCEECCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHH
QQGTTPVSLCIAALRHFRALHSAAAHPDGPAAGLQAMRPPVFGPRRDRMARQASRWGQSA
HCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
LEAALSMLVETDLTLRSASTAPQMAVMERTLIRLAMLPGRGRR
HHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKLSTRDANVYFKRPDTSAAGCLIFGDDAMRVALKRQDLLAALLGAAAEEEMRLTRMTGA
CCCCCCCCEEEEECCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DLRSDSAGLLDAVKAVGFFPGPRAVLVEGATDGLAKVFTAAFEEWQDGDAQIIATAGRLT
CCCCCCHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEECHHHH
AKSALRKVFEGNKRAYAAAIYDDPPGRAEIEDMLKAAGITNTDREAMVDLEGLARSIGPG
HHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCH
DFRQMVDKLGLYKRGDATPVLPADIEAVAPLTREAELDDILHATAEAETGAIGPILVRLK
HHHHHHHHHCCEECCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHH
QQGTTPVSLCIAALRHFRALHSAAAHPDGPAAGLQAMRPPVFGPRRDRMARQASRWGQSA
HCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
LEAALSMLVETDLTLRSASTAPQMAVMERTLIRLAMLPGRGRR
HHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxynucleoside triphosphate; DNAn

Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA