| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89052875
Identifier: 89052875
GI number: 89052875
Start: 389298
End: 389678
Strand: Direct
Name: 89052875
Synonym: Jann_0384
Alternate gene names: NA
Gene position: 389298-389678 (Clockwise)
Preceding gene: 89052874
Following gene: 89052877
Centisome position: 9.02
GC content: 61.15
Gene sequence:
>381_bases GTGGCACGTGCTAGGCAGCGTTGTTCGGGCGGTGTGGGCGGGATGAACTGCGCCCTAAGGCCCGACCTGAATGTGCCGCA TAGGATCGGGTCGCCGTCTGAGCGCGAGGAAGCGTTTTTTTCGCTACCGCGTCGCTACTTGAGCGCGATGATCTACTGCG CGCTATCGCTTCGCTACTTGAGCGCGATGATCTACTGCGCGCTATCGCTTCGCTACTTGAGCGCGATGACCTGCTACGCG CTACCGCGTCGCTACTTGAGCGCGATGACCTGCTACGCGCTACCGCGTCGCTACTTGAGCGCGATGACCTGCTGCGCGCT ATCGCTTCGCTACTTGAGCGCGATGATCTACTGCGCTACCGCTTCGCTACTTGAGCGCTAG
Upstream 100 bases:
>100_bases ACCAATGCGGGCTACGTGCTGGATGAGGGCGCGTGTCCTGGTAACGTGTTCTACGATCCCACGCCCGCGCAGCTGCAACA GGTGCAGCAATGCTACGACA
Downstream 100 bases:
>100_bases AGCACCCGCATCAGCCCTTCGCGCACAAACCGTTTGGCCAGCACCATCTTTCCGGCGTCATCCAAATCGCCCTCCATATC GCCAAGGCGGAAGTCGGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 126; Mature: 125
Protein sequence:
>126_residues MARARQRCSGGVGGMNCALRPDLNVPHRIGSPSEREEAFFSLPRRYLSAMIYCALSLRYLSAMIYCALSLRYLSAMTCYA LPRRYLSAMTCYALPRRYLSAMTCCALSLRYLSAMIYCATASLLER
Sequences:
>Translated_126_residues MARARQRCSGGVGGMNCALRPDLNVPHRIGSPSEREEAFFSLPRRYLSAMIYCALSLRYLSAMIYCALSLRYLSAMTCYA LPRRYLSAMTCYALPRRYLSAMTCCALSLRYLSAMIYCATASLLER >Mature_125_residues ARARQRCSGGVGGMNCALRPDLNVPHRIGSPSEREEAFFSLPRRYLSAMIYCALSLRYLSAMIYCALSLRYLSAMTCYAL PRRYLSAMTCYALPRRYLSAMTCCALSLRYLSAMIYCATASLLER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14210; Mature: 14079
Theoretical pI: Translated: 9.45; Mature: 9.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
7.1 %Cys (Translated Protein) 6.3 %Met (Translated Protein) 13.5 %Cys+Met (Translated Protein) 7.2 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 12.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARARQRCSGGVGGMNCALRPDLNVPHRIGSPSEREEAFFSLPRRYLSAMIYCALSLRYL CCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH SAMIYCALSLRYLSAMTCYALPRRYLSAMTCYALPRRYLSAMTCCALSLRYLSAMIYCAT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASLLER HHHHCC >Mature Secondary Structure ARARQRCSGGVGGMNCALRPDLNVPHRIGSPSEREEAFFSLPRRYLSAMIYCALSLRYL CCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH SAMIYCALSLRYLSAMTCYALPRRYLSAMTCYALPRRYLSAMTCCALSLRYLSAMIYCAT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASLLER HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA