Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89052864

Identifier: 89052864

GI number: 89052864

Start: 376200

End: 377846

Strand: Direct

Name: 89052864

Synonym: Jann_0373

Alternate gene names: NA

Gene position: 376200-377846 (Clockwise)

Preceding gene: 89052863

Following gene: 89052868

Centisome position: 8.71

GC content: 46.08

Gene sequence:

>1647_bases
TTGGCAAAAACGAGGAGTTATTCTCTTTACCTAGTAAAATCTGATGTGGAAGATTTTGAGGATATTTTTAGTGAAAATGC
TAGAGATAAAATTAAAGCTGGTGACGCTTCCTTAAGTGAATCTAGTGAGCTTGGTGACCAAGCAGTAGTTTACATTTTCC
CCGGTCCACCGAAGCCTCCATCATGGCTGTCTGAAGTCACAACAGTGTTCCAAGGCATTCCGGCACTTACAAACAGGTCT
TCTTGTGCTGTAGTCGTCTTCAAGTATGCCAGTCGTATTTTTGTGACGGCATTTGCGCACGGTTGGCAATATTTGGACGA
CTCAAAAATTGAGTCAGACTTTGGTCTAATGGTAGCCATAAATTCTCTTGACGACGCCAAGGTCAAACGCATTGACAGCA
GTCATTTAGGTGAAGCGATGAAGGGGGTATCGCAGTCTGCGTTCCAACGGGATTTGCAGGCTTTCGGCGTAGATGAAGCA
CTGGACTTGGTCCGTCGTATCTCTGGTCGAGTCGAGGATGATGATTTCGCAAGCAGCATCTCTGGCGCTACTGGGCTCAA
GATTACGCGTGAAATGAACCTTTTCGATCTTCCACAAATTGCTGAGGAAGCACTCTCGCGTTCAAAGTCTAAGGATTACC
GGAATACTGGCTTCTACATCATCGATAAGGTCCGCCCTATACTCGATAGAGTTGTTCTCGCGACGTTGGACCAAAAGGCG
GTAGATGTCATCAAGACTGGTGATGACAACTTTGAACTTTCAATGCCTGGTTGGTCGGACGATGACGTTGTGTACTACGG
TCTCTATGGCCCACGTTTAAGGGGGCGTTTTCCTGATTTGCTGATGTCCAATTATCGGGCTGCGCTGGGCTCAACTGAAC
TTGCAAAACTGGACGTAAACAAAATTCAGAAGCATGGAGTTTTGGCGGAATTTAACAATGATGGCGGTGCAAAGAAAAGA
TGGAGTCTCAAGAAAGCGTTGGTCGGTTCTATCGTAGATAGCGGTGGGCTCTATGCCATAAGCGAAGGCGAGTGGTACCG
CTTAGATGAACAATTTAAGGCGGACGTTGATGCAGGATTTGCAACACTCAAAGAAGGTTGGTCAAATCCTCCTGAAGTTA
TCAAAAAAATGGTATCTGATGATGGAAAGAAAACAGGATTTGAGAGCGAGTTTTCCTACAATGAGAGATGCGCCAATAAG
TATGGCCAAGTCTTACTTGATCAAAGGATACTCACAGTACCAGCGATCCCATATGGCAAGTTTGAAGCCGCTGACCTCCT
TGATATTGAAGGTAAACGCCTCATTCACGTGAAAAAAAGCTCTCGGCAGTCCAGTGTTTTAAGTCACTTCTTTAAGCAGG
GTAGTAACTCGGCTCGAATATTGAAAACAATACCAGAGGCTCGCGAAGCGTTGGTCTCTAAAGTAAGGGATCTGACAGAT
GACGTGACAGCCGACTCGTTGCAGACGGCCATGGGGGAAGCTATGTCTGGGTGGAAGATAGAATTCCATATTGTCGATGC
TCCCCGCAAAGACGGTACATTTATGATCCCATTCTTTAGTCGGATCACGCTCCGCGATGAAAGCCGCACTTTGAAGGGAA
TGACTTATGGCGTATCTTTGCGTTTCATACCCATGCCCTCGACATAA

Upstream 100 bases:

>100_bases
GTGTCACAGGGGTACAAGTGAAGAAACATCAGTGCTTTCGTTGACGTGAGCTCTATGCCTTGTAAGAATATACTTAGGTT
TTTCATAAGGTGTATCGGCA

Downstream 100 bases:

>100_bases
CCTTTCAGACGTGAGGTCAAGACCGTTCCACTATCACTGGATGTCTCGCCCAACACCAACCCTCAAACCCCAGTAACCCT
CCGCAAATTCACCCGCTCAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 548; Mature: 547

Protein sequence:

>548_residues
MAKTRSYSLYLVKSDVEDFEDIFSENARDKIKAGDASLSESSELGDQAVVYIFPGPPKPPSWLSEVTTVFQGIPALTNRS
SCAVVVFKYASRIFVTAFAHGWQYLDDSKIESDFGLMVAINSLDDAKVKRIDSSHLGEAMKGVSQSAFQRDLQAFGVDEA
LDLVRRISGRVEDDDFASSISGATGLKITREMNLFDLPQIAEEALSRSKSKDYRNTGFYIIDKVRPILDRVVLATLDQKA
VDVIKTGDDNFELSMPGWSDDDVVYYGLYGPRLRGRFPDLLMSNYRAALGSTELAKLDVNKIQKHGVLAEFNNDGGAKKR
WSLKKALVGSIVDSGGLYAISEGEWYRLDEQFKADVDAGFATLKEGWSNPPEVIKKMVSDDGKKTGFESEFSYNERCANK
YGQVLLDQRILTVPAIPYGKFEAADLLDIEGKRLIHVKKSSRQSSVLSHFFKQGSNSARILKTIPEAREALVSKVRDLTD
DVTADSLQTAMGEAMSGWKIEFHIVDAPRKDGTFMIPFFSRITLRDESRTLKGMTYGVSLRFIPMPST

Sequences:

>Translated_548_residues
MAKTRSYSLYLVKSDVEDFEDIFSENARDKIKAGDASLSESSELGDQAVVYIFPGPPKPPSWLSEVTTVFQGIPALTNRS
SCAVVVFKYASRIFVTAFAHGWQYLDDSKIESDFGLMVAINSLDDAKVKRIDSSHLGEAMKGVSQSAFQRDLQAFGVDEA
LDLVRRISGRVEDDDFASSISGATGLKITREMNLFDLPQIAEEALSRSKSKDYRNTGFYIIDKVRPILDRVVLATLDQKA
VDVIKTGDDNFELSMPGWSDDDVVYYGLYGPRLRGRFPDLLMSNYRAALGSTELAKLDVNKIQKHGVLAEFNNDGGAKKR
WSLKKALVGSIVDSGGLYAISEGEWYRLDEQFKADVDAGFATLKEGWSNPPEVIKKMVSDDGKKTGFESEFSYNERCANK
YGQVLLDQRILTVPAIPYGKFEAADLLDIEGKRLIHVKKSSRQSSVLSHFFKQGSNSARILKTIPEAREALVSKVRDLTD
DVTADSLQTAMGEAMSGWKIEFHIVDAPRKDGTFMIPFFSRITLRDESRTLKGMTYGVSLRFIPMPST
>Mature_547_residues
AKTRSYSLYLVKSDVEDFEDIFSENARDKIKAGDASLSESSELGDQAVVYIFPGPPKPPSWLSEVTTVFQGIPALTNRSS
CAVVVFKYASRIFVTAFAHGWQYLDDSKIESDFGLMVAINSLDDAKVKRIDSSHLGEAMKGVSQSAFQRDLQAFGVDEAL
DLVRRISGRVEDDDFASSISGATGLKITREMNLFDLPQIAEEALSRSKSKDYRNTGFYIIDKVRPILDRVVLATLDQKAV
DVIKTGDDNFELSMPGWSDDDVVYYGLYGPRLRGRFPDLLMSNYRAALGSTELAKLDVNKIQKHGVLAEFNNDGGAKKRW
SLKKALVGSIVDSGGLYAISEGEWYRLDEQFKADVDAGFATLKEGWSNPPEVIKKMVSDDGKKTGFESEFSYNERCANKY
GQVLLDQRILTVPAIPYGKFEAADLLDIEGKRLIHVKKSSRQSSVLSHFFKQGSNSARILKTIPEAREALVSKVRDLTDD
VTADSLQTAMGEAMSGWKIEFHIVDAPRKDGTFMIPFFSRITLRDESRTLKGMTYGVSLRFIPMPST

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60962; Mature: 60830

Theoretical pI: Translated: 5.64; Mature: 5.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKTRSYSLYLVKSDVEDFEDIFSENARDKIKAGDASLSESSELGDQAVVYIFPGPPKPP
CCCCCCEEEEEEECCHHHHHHHHCCCCHHHHCCCCCCCCCHHCCCCCEEEEEECCCCCCH
SWLSEVTTVFQGIPALTNRSSCAVVVFKYASRIFVTAFAHGWQYLDDSKIESDFGLMVAI
HHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCEEEEE
NSLDDAKVKRIDSSHLGEAMKGVSQSAFQRDLQAFGVDEALDLVRRISGRVEDDDFASSI
CCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHC
SGATGLKITREMNLFDLPQIAEEALSRSKSKDYRNTGFYIIDKVRPILDRVVLATLDQKA
CCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHHCHHH
VDVIKTGDDNFELSMPGWSDDDVVYYGLYGPRLRGRFPDLLMSNYRAALGSTELAKLDVN
HHHEECCCCCEEEECCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHH
KIQKHGVLAEFNNDGGAKKRWSLKKALVGSIVDSGGLYAISEGEWYRLDEQFKADVDAGF
HHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCEEECCHHHHHHHHHHH
ATLKEGWSNPPEVIKKMVSDDGKKTGFESEFSYNERCANKYGQVLLDQRILTVPAIPYGK
HHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEECCCCCCCC
FEAADLLDIEGKRLIHVKKSSRQSSVLSHFFKQGSNSARILKTIPEAREALVSKVRDLTD
CCCCCEEECCCCEEEEEECCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
DVTADSLQTAMGEAMSGWKIEFHIVDAPRKDGTFMIPFFSRITLRDESRTLKGMTYGVSL
HHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCEEEECCCEEEECCCCCCCCEEEEEEEE
RFIPMPST
EEEECCCC
>Mature Secondary Structure 
AKTRSYSLYLVKSDVEDFEDIFSENARDKIKAGDASLSESSELGDQAVVYIFPGPPKPP
CCCCCEEEEEEECCHHHHHHHHCCCCHHHHCCCCCCCCCHHCCCCCEEEEEECCCCCCH
SWLSEVTTVFQGIPALTNRSSCAVVVFKYASRIFVTAFAHGWQYLDDSKIESDFGLMVAI
HHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCEEEEE
NSLDDAKVKRIDSSHLGEAMKGVSQSAFQRDLQAFGVDEALDLVRRISGRVEDDDFASSI
CCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHC
SGATGLKITREMNLFDLPQIAEEALSRSKSKDYRNTGFYIIDKVRPILDRVVLATLDQKA
CCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHHCHHH
VDVIKTGDDNFELSMPGWSDDDVVYYGLYGPRLRGRFPDLLMSNYRAALGSTELAKLDVN
HHHEECCCCCEEEECCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHH
KIQKHGVLAEFNNDGGAKKRWSLKKALVGSIVDSGGLYAISEGEWYRLDEQFKADVDAGF
HHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCEEECCHHHHHHHHHHH
ATLKEGWSNPPEVIKKMVSDDGKKTGFESEFSYNERCANKYGQVLLDQRILTVPAIPYGK
HHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEECCCCCCCC
FEAADLLDIEGKRLIHVKKSSRQSSVLSHFFKQGSNSARILKTIPEAREALVSKVRDLTD
CCCCCEEECCCCEEEEEECCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
DVTADSLQTAMGEAMSGWKIEFHIVDAPRKDGTFMIPFFSRITLRDESRTLKGMTYGVSL
HHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCEEEECCCEEEECCCCCCCCEEEEEEEE
RFIPMPST
EEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA