| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89052841
Identifier: 89052841
GI number: 89052841
Start: 353996
End: 354247
Strand: Direct
Name: 89052841
Synonym: Jann_0350
Alternate gene names: NA
Gene position: 353996-354247 (Clockwise)
Preceding gene: 89052840
Following gene: 89052842
Centisome position: 8.2
GC content: 63.1
Gene sequence:
>252_bases ATGCAGGGTCTTGGATTTTTTGCGGCCATCATCGTCGGCGGCCTCGCCGGTTGGATCGCGAGCCGTTTCATGGGGGCGAA TACGGGGATCATCCTCAATATCATCCTCGGCATTGTCGGGGCGGTGGTGGCGAACTTCCTCTTCGGGTTGATCGGGCTGG CCCCCTCGGGTGGCTGGATCATGCAAGGGTTCGTGGGCTTTGTCGGGGCCTGCATCCTGATCGCGGGCCTGCGCATGGTG CGGGGACGCTAG
Upstream 100 bases:
>100_bases TCCATCAACGAGCTGTTGCGCGACTGACCCCTCGCCCTTCCCGTCGCGCCGCCGTTTCAGCTAAGGTGGCGCTCAAACAT CACTGATGAGGAGACGAGAT
Downstream 100 bases:
>100_bases GGGCGCGGCCCCGAACGCCTCTGCCGACTTGACAGGCAACCCCCACCTGCGCCATCCGCGCGGGATGACGGAAAACGAAC CAAAGAAACCCAAAAAGGCG
Product: transglycosylase-associated protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 83; Mature: 83
Protein sequence:
>83_residues MQGLGFFAAIIVGGLAGWIASRFMGANTGIILNIILGIVGAVVANFLFGLIGLAPSGGWIMQGFVGFVGACILIAGLRMV RGR
Sequences:
>Translated_83_residues MQGLGFFAAIIVGGLAGWIASRFMGANTGIILNIILGIVGAVVANFLFGLIGLAPSGGWIMQGFVGFVGACILIAGLRMV RGR >Mature_83_residues MQGLGFFAAIIVGGLAGWIASRFMGANTGIILNIILGIVGAVVANFLFGLIGLAPSGGWIMQGFVGFVGACILIAGLRMV RGR
Specific function: Unknown
COG id: COG2261
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8452; Mature: 8452
Theoretical pI: Translated: 12.50; Mature: 12.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQGLGFFAAIIVGGLAGWIASRFMGANTGIILNIILGIVGAVVANFLFGLIGLAPSGGWI CCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH MQGFVGFVGACILIAGLRMVRGR HHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MQGLGFFAAIIVGGLAGWIASRFMGANTGIILNIILGIVGAVVANFLFGLIGLAPSGGWI CCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH MQGFVGFVGACILIAGLRMVRGR HHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA