Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is yxiO [H]

Identifier: 89052834

GI number: 89052834

Start: 347571

End: 348935

Strand: Direct

Name: yxiO [H]

Synonym: Jann_0343

Alternate gene names: 89052834

Gene position: 347571-348935 (Clockwise)

Preceding gene: 89052833

Following gene: 89052835

Centisome position: 8.05

GC content: 61.39

Gene sequence:

>1365_bases
ATGGACACCGTGCTTCCTTCCACAGCCACAGGCACCCGAAAACGCATCTGGGGCTGGTGGGCCTTTGACTGGGCGAGCCA
GCCCTACAACACCCTTCTTCTGACCTTCATCTTCGGACCTTATGTGAACGAGCTTCTGGGCGACGGCACGCAGGCACAAA
CCGCCTGGGGCTACGGCGTCGGCACGGCGGGCTTCCTGATCGCGATATCGGCCCCGTTTCTGGGCGCGATGGCAGATCTG
TCGGGGCGGCGGATACCGTTCATCTGGCTGTTCTCGGTCATGTATTTCGTCGGATCTTATGGCTTGTGGTGGGCCGCGCC
GGGGGATTTCAACCTGATGCTCACCTTGATCCTGTTCGCCATCGGGCTGATCGGGATGGAGTTCGCGACGATCTTCACCA
ACGCCATGCTGCCGACACTTGGGGGGCGGAACGAGATCGGGCGGATCTCAGGCTCCGGGTTTGCCTGGGGCTATGTTGGC
GGGCTGATCGCGCTGGTCCTGATGCTGTTTTTCTTCGCCGAGAATGCGGAAACCGGGAAAACCCTTCTGGGGCTCGATCC
AATCCTTGGCCTTGACGCAGAAACGCGGGAGGGAACGCGCGCCGTCGGGCCGCTGACCGCGATCTGGTTTGGCATTGGCA
TGATCCCGTTCTTCTTGTGGGTGCGCGACACGCCATTGCCCGGTGCGGTGCCCATGGGTCAGGCCCTGCGCGGTGCCATG
CCCGCCTTGATGAAAACCCTGCGCCGACTGCCGTCGGAGAAGCCGTTGATGGCCTATCTGCTGTCGTCGATGTTTTACCG
TGACGCGCTCAACGGCATGTACGTCTTTGGCGGTATCTATGCCTCGGGCGTTCTGGGGTGGAGCGTTGTGGATGTGGGCA
TTTTCGGCATCCTCGCGATCCTGACCGGTGCGTTTTTCTCCTGGCTTGGGGGGCGCGCTGACGGGCGCTTCGGGCCGAAA
CCCGTGATCGTGTTGAATGTCATTCTGCTGAGCTTCGTGGCGCTGGCCGTCGTGTTTGTCAGCCGTGACAGCGTGTTGGG
CATCCCGGTCGCCGAGGGCTCGTCCTTGCCCGACATTGCCTTCTATATCCTTGGCGCGTTCATCGGCGCGTGCGGGGGTG
CGCTTCAATCGTCATCGCGCACGATGCTGGTGCGCCAGGCCTATCCTGACCGCATGACGGAGGCGTTCGGCCTCTATGCG
CTGGCGGGCAAGGCCACATCCTTCATTGCACCGCTGTCCATCGGTGTGGTCACACAGATTTCAGGCAGCCAACAGGTGGG
GGTTGTCCCGCTGGTTGTTTTGTTCACTATTGGCTTGATTTTGCTGTTTTGGGTCGACCCGCAGGGTCGCAAGACGAATG
ACTGA

Upstream 100 bases:

>100_bases
ACGCTGGGCTGAGGCCGACGGGACACGGCCCTGGCCACCGGAATTCTAGGGCGACGCTTAGCCGTGGACAAACCGGGCGC
TGCAAAGGAAGGTTAATGTC

Downstream 100 bases:

>100_bases
TCCCGCAGGGTCGCAAGACGAATGACTGATCCCGCAGGGTCGCAAGACGAATGACTGATCCCGCAGGGTCGCAATGCAAA
TGATTGATCCCGCAGGGTCG

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 454; Mature: 454

Protein sequence:

>454_residues
MDTVLPSTATGTRKRIWGWWAFDWASQPYNTLLLTFIFGPYVNELLGDGTQAQTAWGYGVGTAGFLIAISAPFLGAMADL
SGRRIPFIWLFSVMYFVGSYGLWWAAPGDFNLMLTLILFAIGLIGMEFATIFTNAMLPTLGGRNEIGRISGSGFAWGYVG
GLIALVLMLFFFAENAETGKTLLGLDPILGLDAETREGTRAVGPLTAIWFGIGMIPFFLWVRDTPLPGAVPMGQALRGAM
PALMKTLRRLPSEKPLMAYLLSSMFYRDALNGMYVFGGIYASGVLGWSVVDVGIFGILAILTGAFFSWLGGRADGRFGPK
PVIVLNVILLSFVALAVVFVSRDSVLGIPVAEGSSLPDIAFYILGAFIGACGGALQSSSRTMLVRQAYPDRMTEAFGLYA
LAGKATSFIAPLSIGVVTQISGSQQVGVVPLVVLFTIGLILLFWVDPQGRKTND

Sequences:

>Translated_454_residues
MDTVLPSTATGTRKRIWGWWAFDWASQPYNTLLLTFIFGPYVNELLGDGTQAQTAWGYGVGTAGFLIAISAPFLGAMADL
SGRRIPFIWLFSVMYFVGSYGLWWAAPGDFNLMLTLILFAIGLIGMEFATIFTNAMLPTLGGRNEIGRISGSGFAWGYVG
GLIALVLMLFFFAENAETGKTLLGLDPILGLDAETREGTRAVGPLTAIWFGIGMIPFFLWVRDTPLPGAVPMGQALRGAM
PALMKTLRRLPSEKPLMAYLLSSMFYRDALNGMYVFGGIYASGVLGWSVVDVGIFGILAILTGAFFSWLGGRADGRFGPK
PVIVLNVILLSFVALAVVFVSRDSVLGIPVAEGSSLPDIAFYILGAFIGACGGALQSSSRTMLVRQAYPDRMTEAFGLYA
LAGKATSFIAPLSIGVVTQISGSQQVGVVPLVVLFTIGLILLFWVDPQGRKTND
>Mature_454_residues
MDTVLPSTATGTRKRIWGWWAFDWASQPYNTLLLTFIFGPYVNELLGDGTQAQTAWGYGVGTAGFLIAISAPFLGAMADL
SGRRIPFIWLFSVMYFVGSYGLWWAAPGDFNLMLTLILFAIGLIGMEFATIFTNAMLPTLGGRNEIGRISGSGFAWGYVG
GLIALVLMLFFFAENAETGKTLLGLDPILGLDAETREGTRAVGPLTAIWFGIGMIPFFLWVRDTPLPGAVPMGQALRGAM
PALMKTLRRLPSEKPLMAYLLSSMFYRDALNGMYVFGGIYASGVLGWSVVDVGIFGILAILTGAFFSWLGGRADGRFGPK
PVIVLNVILLSFVALAVVFVSRDSVLGIPVAEGSSLPDIAFYILGAFIGACGGALQSSSRTMLVRQAYPDRMTEAFGLYA
LAGKATSFIAPLSIGVVTQISGSQQVGVVPLVVLFTIGLILLFWVDPQGRKTND

Specific function: Unknown

COG id: COG2270

COG function: function code R; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR016196 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48726; Mature: 48726

Theoretical pI: Translated: 8.34; Mature: 8.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTVLPSTATGTRKRIWGWWAFDWASQPYNTLLLTFIFGPYVNELLGDGTQAQTAWGYGV
CCCCCCCCCCCCHHHEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
GTAGFLIAISAPFLGAMADLSGRRIPFIWLFSVMYFVGSYGLWWAAPGDFNLMLTLILFA
CHHHHHHHHHCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHH
IGLIGMEFATIFTNAMLPTLGGRNEIGRISGSGFAWGYVGGLIALVLMLFFFAENAETGK
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
TLLGLDPILGLDAETREGTRAVGPLTAIWFGIGMIPFFLWVRDTPLPGAVPMGQALRGAM
EEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
PALMKTLRRLPSEKPLMAYLLSSMFYRDALNGMYVFGGIYASGVLGWSVVDVGIFGILAI
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHH
LTGAFFSWLGGRADGRFGPKPVIVLNVILLSFVALAVVFVSRDSVLGIPVAEGSSLPDIA
HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHH
FYILGAFIGACGGALQSSSRTMLVRQAYPDRMTEAFGLYALAGKATSFIAPLSIGVVTQI
HHHHHHHHHHHCHHHCCCCCEEEEHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHCEEEEE
SGSQQVGVVPLVVLFTIGLILLFWVDPQGRKTND
CCCCCCCHHHHHHHHHHHHHHHHEECCCCCCCCC
>Mature Secondary Structure
MDTVLPSTATGTRKRIWGWWAFDWASQPYNTLLLTFIFGPYVNELLGDGTQAQTAWGYGV
CCCCCCCCCCCCHHHEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
GTAGFLIAISAPFLGAMADLSGRRIPFIWLFSVMYFVGSYGLWWAAPGDFNLMLTLILFA
CHHHHHHHHHCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHH
IGLIGMEFATIFTNAMLPTLGGRNEIGRISGSGFAWGYVGGLIALVLMLFFFAENAETGK
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
TLLGLDPILGLDAETREGTRAVGPLTAIWFGIGMIPFFLWVRDTPLPGAVPMGQALRGAM
EEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
PALMKTLRRLPSEKPLMAYLLSSMFYRDALNGMYVFGGIYASGVLGWSVVDVGIFGILAI
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHH
LTGAFFSWLGGRADGRFGPKPVIVLNVILLSFVALAVVFVSRDSVLGIPVAEGSSLPDIA
HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHH
FYILGAFIGACGGALQSSSRTMLVRQAYPDRMTEAFGLYALAGKATSFIAPLSIGVVTQI
HHHHHHHHHHHCHHHCCCCCEEEEHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHCEEEEE
SGSQQVGVVPLVVLFTIGLILLFWVDPQGRKTND
CCCCCCCHHHHHHHHHHHHHHHHEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969509; 9384377 [H]