| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is zur [H]
Identifier: 89052804
GI number: 89052804
Start: 320905
End: 321423
Strand: Direct
Name: zur [H]
Synonym: Jann_0313
Alternate gene names: 89052804
Gene position: 320905-321423 (Clockwise)
Preceding gene: 89052802
Following gene: 89052805
Centisome position: 7.43
GC content: 61.66
Gene sequence:
>519_bases ATGACAAGTGACGCGCGCTCTCAAGACGCGGGAAATGATACGCCTCTTGGGTTCCAAAATCATGATCACAGGGCGTGTGT GGCGGACGCGCTGGCCTCGGCCGATGCGCGCAGCACGGCGGAGGGACTGCGACTGACCCCGGTGCGGCGAAAGGTTCTGG AGCTGTTGTTGCAGGAACACCGTGCGCTTGGGGCCTATGCGATCCTTGATCTACTGCGCGATGCCGGGTTCGGATCACAA CCGCCTGTGGCCTACCGCGCGCTGGATTTTCTTGTTGAGAACGGGTTTGTCCACAAAATCGAGCGTCTGAACGCGTTTGT GGCATGCGCCCATCCCGGTCAAACCCACTCGCCTGCCTTCATGATTTGTCGCAAATGCGATGCGGTGGCCGAGGCGCATT CCGCACCGGCGAAAGGGGCGCTTGGAGCGGCTGCACGGGCCACCGGCTTCCAGATTGAACGAACCGTGGTAGAGGCCGAA GGGGTGTGCCCCGCCTGTGTCGAAAAGGACGAGGCATGA
Upstream 100 bases:
>100_bases ATCAGGGCTGCCGTGGCGGAAATGGATAGAAGCTTTCTGGACATAGGTCTCTCCACGTGATCTTATAACATTATTGGCGG CATAACTGATATGAAATAAC
Downstream 100 bases:
>100_bases GCCTGATCACAGTGGAAAACCTGAGCGTCCGCTACGGCGCGAACACCGTCTTGCGCAATGTCGCGTTGACCGTTGAACCC GGTGAGATCGTGACGATTGT
Product: ferric uptake regulator family protein
Products: NA
Alternate protein names: Zinc uptake regulator [H]
Number of amino acids: Translated: 172; Mature: 171
Protein sequence:
>172_residues MTSDARSQDAGNDTPLGFQNHDHRACVADALASADARSTAEGLRLTPVRRKVLELLLQEHRALGAYAILDLLRDAGFGSQ PPVAYRALDFLVENGFVHKIERLNAFVACAHPGQTHSPAFMICRKCDAVAEAHSAPAKGALGAAARATGFQIERTVVEAE GVCPACVEKDEA
Sequences:
>Translated_172_residues MTSDARSQDAGNDTPLGFQNHDHRACVADALASADARSTAEGLRLTPVRRKVLELLLQEHRALGAYAILDLLRDAGFGSQ PPVAYRALDFLVENGFVHKIERLNAFVACAHPGQTHSPAFMICRKCDAVAEAHSAPAKGALGAAARATGFQIERTVVEAE GVCPACVEKDEA >Mature_171_residues TSDARSQDAGNDTPLGFQNHDHRACVADALASADARSTAEGLRLTPVRRKVLELLLQEHRALGAYAILDLLRDAGFGSQP PVAYRALDFLVENGFVHKIERLNAFVACAHPGQTHSPAFMICRKCDAVAEAHSAPAKGALGAAARATGFQIERTVVEAEG VCPACVEKDEA
Specific function: Acts as a negative controlling element, employing Zn(2+) as a cofactor to bind the operator of the repressed genes (znuACB) [H]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fur family [H]
Homologues:
Organism=Escherichia coli, GI87082363, Length=141, Percent_Identity=43.2624113475177, Blast_Score=114, Evalue=3e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002481 - InterPro: IPR011991 [H]
Pfam domain/function: PF01475 FUR [H]
EC number: NA
Molecular weight: Translated: 18305; Mature: 18174
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSDARSQDAGNDTPLGFQNHDHRACVADALASADARSTAEGLRLTPVRRKVLELLLQEH CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHCCCEECHHHHHHHHHHHHHH RALGAYAILDLLRDAGFGSQPPVAYRALDFLVENGFVHKIERLNAFVACAHPGQTHSPAF HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHEEECCCCCCCCCHH MICRKCDAVAEAHSAPAKGALGAAARATGFQIERTVVEAEGVCPACVEKDEA HHHHHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCHHHHCCCCC >Mature Secondary Structure TSDARSQDAGNDTPLGFQNHDHRACVADALASADARSTAEGLRLTPVRRKVLELLLQEH CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHCCCEECHHHHHHHHHHHHHH RALGAYAILDLLRDAGFGSQPPVAYRALDFLVENGFVHKIERLNAFVACAHPGQTHSPAF HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHEEECCCCCCCCCHH MICRKCDAVAEAHSAPAKGALGAAARATGFQIERTVVEAEGVCPACVEKDEA HHHHHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8265357; 9278503; 9680209 [H]