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The map label for this gene is 89052797

Identifier: 89052797

GI number: 89052797

Start: 313254

End: 314249

Strand: Direct

Name: 89052797

Synonym: Jann_0306

Alternate gene names: NA

Gene position: 313254-314249 (Clockwise)

Preceding gene: 89052796

Following gene: 89052798

Centisome position: 7.25

GC content: 63.35

Gene sequence:

>996_bases
ATGATTATCCGCCCCAAAGACCTGACCCGCCGCTCCGTTCTGGCAACCGGTGCAACCGCGCTTGGTGCACTGGCCGTCGC
GCCGAAAATGGCGTTCGCGCAGACCGCTGTCAGTCTGCAATTGTCCTGGCTGCATTCGACGCAATTCGCGGGCAGCTACA
TGGCGTCAGACCGTGGCTTCTGGAGCGAGGCCGGCCTTGACGTTTCCTTGCTGCCCGGCGGTCCGAATGCGCCGGTGGAA
CCGCCGGTTGTGGCAGGCACCGCGCTGGTTGGGATTTCCGCCGCCGACTACACCGCTGCTGCGGTGGAGGAAGGCGCGCC
CTTCAAGATCATCGGTGTCGCGATGCAGAATAACCCCTTCGCGATCACGTCGCTGACGTCCAACCCGGTGAATGTGCCCG
GCGATCTTGAGGGTAAGCGGATCGGGATGGCGCTGGCCAACACGCCCGTCCTGCGCGCGCTGTGCACGCTGAACGGCGTC
GACTTTGACGCGATTGAAGTGATCCCGACGCAATATTCGCCGCAGCCGCTGGTTGCCGGAGAGGTCGATTGCCTGCTCAG
CTGGGAAACCGACCTGCCCGTCGCATTGACCGTTCAGGGCATCGACAACACGACCATGCTGCTGGCTGATCACGGTTACG
CGGTGCACTCGCAGACCTATATTGCAACGGAAGACAGCCTCGCCAACCGGCGCGCGGATATTGTGGCCCTGATGGCCGGG
GAAGTCGCTGGGTGGGAGGCTTATCGCGAAGATACCGACGCCGCCACGGATCTGACATTGTCGATGTTCCCCGATGCCGG
GCTGGACCGGGAAACGCAGCTTCTGCAAGCCGCCCGCCAGGTGCCGCTGATGTTCTCGAACCTCACCGACGCCAATGGGT
TTGGCTGGTGGACTGACGACACTGTGGCGGCCAATATCGAAACGCTCGCCTTGCTGGATCGGACCGTGACGCCGGATCTC
TGGGACCGGTCGATCCTGGAAGAGGTGCACGGCTGA

Upstream 100 bases:

>100_bases
TGGATGCGACCAAACGCACCTGTGTTTGGACGACGGCGCGCTAAATGATTAACAAAACCACGCGGTTCGCCGTGATTCAG
TCGACAGAGAGAAGTATTCT

Downstream 100 bases:

>100_bases
ACCATGTCCTCCGAGGTGATCTGCAAAGCGCTCGCCAAGACCTACCGGGGTGGGGTGGAGGCGGTGCGTCCGCTGGACCT
GACCTTGGCGTCGGGCCAGA

Product: twin-arginine translocation pathway signal

Products: NA

Alternate protein names: NMT1/THI5-Like Domain-Containing Protein; Diguanylate Cyclase; Histidine Kinase; Twin-Arginine Translocation Pathway Signal; ABC Transporter Periplasmic; NMT1/THI5 Like Family; GGDEF Domain-Containing Protein; NMT1/THI5-Like Protein; PAS Sensor Protein; NMT1/THI5 Like Domain-Containing Protein; Thiamine Biosynthesis Protein; Sensory Box Histidine Kinase; PAS/PAC Sensor Hybrid Histidine Kinase; Nlpa Lipoprotein; ABC Transporter Periplasmic Components; Two Domain Sensory Box Histidine Kinase; Signal Transduction Protein; Nitrate/Sulfonate/Bicarbonate ABC Transporter; Nitrate/Sulfonate ABC Transporter; Diguanylate Cyclase Domain Protein; Diguanylate Cyclase/Phosphodiesterase; Sensory Transduction Histidine Kinase; Diguanylate Cyclase With PAS/PAC Sensor; NMT1/THI5-Ike Domain-Containing Protein; NMT1/THI5 Family Protein; PAS/GGDEF Domain-Containing Protein; Signal Transduction Response Regulator; PAS/PAC Sensor Signal Transduction Histidine Kinase; Two-Component Sensor Histidine Kinase; Permease Protein Of ABC Transporter; Periplasmic-Component Of ABC Transporter; Diguanylate Cyclase With Extracellular Sensor; PasGgdef; Two-Component Sensor Protein; Lipoprotein; PAS/PAC Sensor-Containing Diguanylate Cyclase; Multi-Sensor Signal Transduction Histidine Kinase

Number of amino acids: Translated: 331; Mature: 331

Protein sequence:

>331_residues
MIIRPKDLTRRSVLATGATALGALAVAPKMAFAQTAVSLQLSWLHSTQFAGSYMASDRGFWSEAGLDVSLLPGGPNAPVE
PPVVAGTALVGISAADYTAAAVEEGAPFKIIGVAMQNNPFAITSLTSNPVNVPGDLEGKRIGMALANTPVLRALCTLNGV
DFDAIEVIPTQYSPQPLVAGEVDCLLSWETDLPVALTVQGIDNTTMLLADHGYAVHSQTYIATEDSLANRRADIVALMAG
EVAGWEAYREDTDAATDLTLSMFPDAGLDRETQLLQAARQVPLMFSNLTDANGFGWWTDDTVAANIETLALLDRTVTPDL
WDRSILEEVHG

Sequences:

>Translated_331_residues
MIIRPKDLTRRSVLATGATALGALAVAPKMAFAQTAVSLQLSWLHSTQFAGSYMASDRGFWSEAGLDVSLLPGGPNAPVE
PPVVAGTALVGISAADYTAAAVEEGAPFKIIGVAMQNNPFAITSLTSNPVNVPGDLEGKRIGMALANTPVLRALCTLNGV
DFDAIEVIPTQYSPQPLVAGEVDCLLSWETDLPVALTVQGIDNTTMLLADHGYAVHSQTYIATEDSLANRRADIVALMAG
EVAGWEAYREDTDAATDLTLSMFPDAGLDRETQLLQAARQVPLMFSNLTDANGFGWWTDDTVAANIETLALLDRTVTPDL
WDRSILEEVHG
>Mature_331_residues
MIIRPKDLTRRSVLATGATALGALAVAPKMAFAQTAVSLQLSWLHSTQFAGSYMASDRGFWSEAGLDVSLLPGGPNAPVE
PPVVAGTALVGISAADYTAAAVEEGAPFKIIGVAMQNNPFAITSLTSNPVNVPGDLEGKRIGMALANTPVLRALCTLNGV
DFDAIEVIPTQYSPQPLVAGEVDCLLSWETDLPVALTVQGIDNTTMLLADHGYAVHSQTYIATEDSLANRRADIVALMAG
EVAGWEAYREDTDAATDLTLSMFPDAGLDRETQLLQAARQVPLMFSNLTDANGFGWWTDDTVAANIETLALLDRTVTPDL
WDRSILEEVHG

Specific function: Unknown

COG id: COG0715

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35126; Mature: 35126

Theoretical pI: Translated: 4.04; Mature: 4.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIRPKDLTRRSVLATGATALGALAVAPKMAFAQTAVSLQLSWLHSTQFAGSYMASDRGF
CCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHEEEEEEEEEECCHHCCCHHCCCCCC
WSEAGLDVSLLPGGPNAPVEPPVVAGTALVGISAADYTAAAVEEGAPFKIIGVAMQNNPF
CHHCCCEEEEECCCCCCCCCCCEEECEEEEEEECCCCHHHHHCCCCCEEEEEEEECCCCE
AITSLTSNPVNVPGDLEGKRIGMALANTPVLRALCTLNGVDFDAIEVIPTQYSPQPLVAG
EEEEECCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCC
EVDCLLSWETDLPVALTVQGIDNTTMLLADHGYAVHSQTYIATEDSLANRRADIVALMAG
CEEEEEEECCCCCEEEEEECCCCEEEEEEECCEEEECCEEEEECHHHHHCCCEEEEEEEC
EVAGWEAYREDTDAATDLTLSMFPDAGLDRETQLLQAARQVPLMFSNLTDANGFGWWTDD
CCCCCHHHHCCCCCHHEEEEEECCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCCCCCC
TVAANIETLALLDRTVTPDLWDRSILEEVHG
EEECCHHEEEEHHCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MIIRPKDLTRRSVLATGATALGALAVAPKMAFAQTAVSLQLSWLHSTQFAGSYMASDRGF
CCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHEEEEEEEEEECCHHCCCHHCCCCCC
WSEAGLDVSLLPGGPNAPVEPPVVAGTALVGISAADYTAAAVEEGAPFKIIGVAMQNNPF
CHHCCCEEEEECCCCCCCCCCCEEECEEEEEEECCCCHHHHHCCCCCEEEEEEEECCCCE
AITSLTSNPVNVPGDLEGKRIGMALANTPVLRALCTLNGVDFDAIEVIPTQYSPQPLVAG
EEEEECCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCC
EVDCLLSWETDLPVALTVQGIDNTTMLLADHGYAVHSQTYIATEDSLANRRADIVALMAG
CEEEEEEECCCCCEEEEEECCCCEEEEEEECCEEEECCEEEEECHHHHHCCCEEEEEEEC
EVAGWEAYREDTDAATDLTLSMFPDAGLDRETQLLQAARQVPLMFSNLTDANGFGWWTDD
CCCCCHHHHCCCCCHHEEEEEECCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCCCCCC
TVAANIETLALLDRTVTPDLWDRSILEEVHG
EEECCHHEEEEHHCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA