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The map label for this gene is 89052769

Identifier: 89052769

GI number: 89052769

Start: 284199

End: 285170

Strand: Reverse

Name: 89052769

Synonym: Jann_0278

Alternate gene names: NA

Gene position: 285170-284199 (Counterclockwise)

Preceding gene: 89052770

Following gene: 89052767

Centisome position: 6.6

GC content: 63.89

Gene sequence:

>972_bases
ATGCTCCCCGACGGTTTGATCTACTATCCCGATAGCCAGCCCGGCATTTCCCGGCGTCGCTGCGGACGTGGGTTCAGCTA
TCGCGCGCCCGACGGCACCACCATCGCAGATACCGATATGCGGCGCCGGATCGACGCATTGGCCGTGCCGCCAGCCTATA
ACCATGTCTGGATCAGCCCGCGTCTGAATGGGCATCTGCAAGCCACGGGATATGATGCCGCGACGCGCAAGCAATACCGC
TACCACCCCGACTGGACCCGCTTCCGCGCCAATCGCAAGTTCGAGGATCTGCCACGGTTCGGTCATGCGCTGCCCCGCCT
GCGCGCGGCAATCCGAACTGGGCTGGAGGCAGAACCGGGCAGCCGTGACTTCGTGCTGGCCGCCGTTCTGGGCCTGATCG
ACCGTCTCTCGCTCCGCCCCGGTCATCCGGACTATGCGGAGGCCAACGGCAGTTTCGGGGCAACAACGCTCCGCTCCCGC
CACCTTCTGGCCGACGAGGACGGGACGCGGCTGCGGTTTCTGGCCAAGGGTGGCCAAAAGGTCAGCAAGACCCTGCGCGA
CAAGACGTTGGCCCGGGCCCTTCACAAACTTGATGATCTCCCCGGCGCGCCCATCGCGACCTGGCTGGAGGGTGATGAGG
TGCGCACCGTCTCGCCTGATATGCTGGCGTCCTTCATGGCAGATGTAACCGGAGAAGATGGGCTGACACCAAAAACCTTC
CGCACATGGAATGGATCGGTCGCTGCGATGGATGTGGCCCTGAGCAATGACGATCTGACGATCTCCGCCATGGCCGATGC
GGCGGCAAAACGGCTTAACAACACGCCGACGATGGCCCGCAACAGCTACATCCACCCGGAGGTGATCGCGTTGAGCGAGA
CGGAGCCGGATGTCCGCAAGATCCTTGCCGACGCGACAACCCCCACACGGTTGCGCAGGTCAGAGCGCGCCCTGCTAAAC
CTGATCGGCTGA

Upstream 100 bases:

>100_bases
CGACCTTCTGCGCGGTATCCGCGCCGTGCTGGACCGCGACGAGCCTGACTACGCAAACTGACGGTGGGAACTGGTCCGCC
CCTTCTGGCGTTGTCTGTTT

Downstream 100 bases:

>100_bases
CAGTGCCTTTGCGTGAAGGATACGCCCGATGAGGTTCAGCAGAACCTGCGCCGCAAGGATCGCCGTCGTGCCGTCCCGGT
CGTAATCCGGTGCGACCTCC

Product: putative DNA topoisomerase I protein

Products: NA

Alternate protein names: DNA poisomerase I; DNA poisomerase Type I; DNA poisomerase IB; Type I poisomerase; DNA poisomerase I Protein; Poisomerase IB; Poisomerase IB-Like Protein; DNA poisomerase I-Like Protein; Viral-Like DNA poisomerase; DNA poisomerasei; -Like DNA poisomerase I; DNA poisomerase ; Type I DNA poisomerase; Eukaryotic-Like DNA poisomerase I

Number of amino acids: Translated: 323; Mature: 323

Protein sequence:

>323_residues
MLPDGLIYYPDSQPGISRRRCGRGFSYRAPDGTTIADTDMRRRIDALAVPPAYNHVWISPRLNGHLQATGYDAATRKQYR
YHPDWTRFRANRKFEDLPRFGHALPRLRAAIRTGLEAEPGSRDFVLAAVLGLIDRLSLRPGHPDYAEANGSFGATTLRSR
HLLADEDGTRLRFLAKGGQKVSKTLRDKTLARALHKLDDLPGAPIATWLEGDEVRTVSPDMLASFMADVTGEDGLTPKTF
RTWNGSVAAMDVALSNDDLTISAMADAAAKRLNNTPTMARNSYIHPEVIALSETEPDVRKILADATTPTRLRRSERALLN
LIG

Sequences:

>Translated_323_residues
MLPDGLIYYPDSQPGISRRRCGRGFSYRAPDGTTIADTDMRRRIDALAVPPAYNHVWISPRLNGHLQATGYDAATRKQYR
YHPDWTRFRANRKFEDLPRFGHALPRLRAAIRTGLEAEPGSRDFVLAAVLGLIDRLSLRPGHPDYAEANGSFGATTLRSR
HLLADEDGTRLRFLAKGGQKVSKTLRDKTLARALHKLDDLPGAPIATWLEGDEVRTVSPDMLASFMADVTGEDGLTPKTF
RTWNGSVAAMDVALSNDDLTISAMADAAAKRLNNTPTMARNSYIHPEVIALSETEPDVRKILADATTPTRLRRSERALLN
LIG
>Mature_323_residues
MLPDGLIYYPDSQPGISRRRCGRGFSYRAPDGTTIADTDMRRRIDALAVPPAYNHVWISPRLNGHLQATGYDAATRKQYR
YHPDWTRFRANRKFEDLPRFGHALPRLRAAIRTGLEAEPGSRDFVLAAVLGLIDRLSLRPGHPDYAEANGSFGATTLRSR
HLLADEDGTRLRFLAKGGQKVSKTLRDKTLARALHKLDDLPGAPIATWLEGDEVRTVSPDMLASFMADVTGEDGLTPKTF
RTWNGSVAAMDVALSNDDLTISAMADAAAKRLNNTPTMARNSYIHPEVIALSETEPDVRKILADATTPTRLRRSERALLN
LIG

Specific function: Unknown

COG id: COG3569

COG function: function code L; Topoisomerase IB

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35756; Mature: 35756

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPDGLIYYPDSQPGISRRRCGRGFSYRAPDGTTIADTDMRRRIDALAVPPAYNHVWISP
CCCCCEEECCCCCCCCHHHHHCCCCCCCCCCCCEECCHHHHHHHHHEECCCCCCEEEECC
RLNGHLQATGYDAATRKQYRYHPDWTRFRANRKFEDLPRFGHALPRLRAAIRTGLEAEPG
CCCCEEEECCCCHHHHCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
SRDFVLAAVLGLIDRLSLRPGHPDYAEANGSFGATTLRSRHLLADEDGTRLRFLAKGGQK
CCHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCHHHHCCCEECCCCCCEEEEEECCCHH
VSKTLRDKTLARALHKLDDLPGAPIATWLEGDEVRTVSPDMLASFMADVTGEDGLTPKTF
HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEECHHHHHHHHHHCCCCCCCCCCEE
RTWNGSVAAMDVALSNDDLTISAMADAAAKRLNNTPTMARNSYIHPEVIALSETEPDVRK
ECCCCCEEEEEEEECCCCEEEEHHHHHHHHHCCCCCCHHCCCCCCCEEEEECCCCHHHHH
ILADATTPTRLRRSERALLNLIG
HHHCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLPDGLIYYPDSQPGISRRRCGRGFSYRAPDGTTIADTDMRRRIDALAVPPAYNHVWISP
CCCCCEEECCCCCCCCHHHHHCCCCCCCCCCCCEECCHHHHHHHHHEECCCCCCEEEECC
RLNGHLQATGYDAATRKQYRYHPDWTRFRANRKFEDLPRFGHALPRLRAAIRTGLEAEPG
CCCCEEEECCCCHHHHCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
SRDFVLAAVLGLIDRLSLRPGHPDYAEANGSFGATTLRSRHLLADEDGTRLRFLAKGGQK
CCHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCHHHHCCCEECCCCCCEEEEEECCCHH
VSKTLRDKTLARALHKLDDLPGAPIATWLEGDEVRTVSPDMLASFMADVTGEDGLTPKTF
HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEECHHHHHHHHHHCCCCCCCCCCEE
RTWNGSVAAMDVALSNDDLTISAMADAAAKRLNNTPTMARNSYIHPEVIALSETEPDVRK
ECCCCCEEEEEEEECCCCEEEEHHHHHHHHHCCCCCCHHCCCCCCCEEEEECCCCHHHHH
ILADATTPTRLRRSERALLNLIG
HHHCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA