| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is yibF [C]
Identifier: 89052766
GI number: 89052766
Start: 281693
End: 282358
Strand: Reverse
Name: yibF [C]
Synonym: Jann_0275
Alternate gene names: 89052766
Gene position: 282358-281693 (Counterclockwise)
Preceding gene: 89052767
Following gene: 89052765
Centisome position: 6.54
GC content: 59.91
Gene sequence:
>666_bases ATGAACCGCCTCTATCATTTCCCCCTCTCGCCTTTCTGTCGCAAGGTTCGCCTGATCCTGGCCGAAAAGCGGATCGAGGT GGAGTTGGTGGAAGAAAAGTATTGGGAGCCATCCACGGAGTTCCTGCGCCGCAACCCGGCGGGCAAAGTTCCGATCCTGA AGATCGACGGCATCACACTGAGTGACAGCACTGCGATCTGCGAGTATATCGAGGAAACGGTGCCAGAACCTGCCTTGATG CCGCGCGACCCCGCGCACCGCGCCGAGGTCCGCCGTCTGGTGGCTTGGTTCGACGACAAGTTCCACGCCGAAGTCACACG CAATTTGGTGCACGAACGTGTGCACAAGAAACTGATGCGCAGCGGCTATCCCGATGGACGCGCGGTGAAGGCCGGGGCGC AGAACATCAAGTTCCACATCCGGTACATGGATTGGCTGCTGGACCATCGCCGCTGGCTGGCGGGCGACAAGATGACGATG GCGGACTTCACCGCTGCCGCGCATTTGAGCTGTCTGGATTACATCTCGGACGTGGACTGGTCCCTGAGTGAGCCCGTGAA AGACTGGTACGCGACGATCAAGTCAAGGCCCGCATTCCGGTCCATCCTGGCCGATCAGATCTTTGGCTTCCCGCAGCCGC CCCACTACGCGAACCTGGACTTTTGA
Upstream 100 bases:
>100_bases GGCTTTGATCCGCGCGGATGGGCGCGCTGATTGCTTTGCGAATTGATTTTTCCCCGGCCAGCTTGCAAAGACAACCGAAC ACACTGACGAGCAGCCCCCG
Downstream 100 bases:
>100_bases CCGATCTGAAAGACGCCCTTCGGACCGAGGCCCTTGATGCGGGCTTTGCAAAGATGGGGGTTTGCAGCCCAAATGCGGTG CCCGAAACGGCGGCGCGGCT
Product: glutathione S-transferase-like protein
Products: HX; R-S-glutathione
Alternate protein names: Glutathione S-Transferase Domain-Containing Protein; Glutathione S-Transferase Domain Protein; Glutathione S-Transferase Family Protein; Glutathione S-Transferase-Like Protein; Glutathione S-Transferase-Like; Stringent Starvation Protein A; Glutathione S-Transferase Protein; Glutathione S-Transferase Domain; Glutathione Transferase; Glutathione S-Transferase N-Terminal Domain Protein; Glutathione S-Transferase III; Unkown Function; Gst-Related Protein; Protein LigF; Transferase; GSH-Dependent Dehydroascorbate Reductase; Maleylacetoacetate Isomerase; Glutathione S-Transferase C-Terminal Domain Protein; Glutathione S- Transferase N-Terminal; Glutathione S-Transferase With Thioredoxin-Like Domain; Transcription Modulator Protein; Glutathione S-Transferase Zeta Class
Number of amino acids: Translated: 221; Mature: 221
Protein sequence:
>221_residues MNRLYHFPLSPFCRKVRLILAEKRIEVELVEEKYWEPSTEFLRRNPAGKVPILKIDGITLSDSTAICEYIEETVPEPALM PRDPAHRAEVRRLVAWFDDKFHAEVTRNLVHERVHKKLMRSGYPDGRAVKAGAQNIKFHIRYMDWLLDHRRWLAGDKMTM ADFTAAAHLSCLDYISDVDWSLSEPVKDWYATIKSRPAFRSILADQIFGFPQPPHYANLDF
Sequences:
>Translated_221_residues MNRLYHFPLSPFCRKVRLILAEKRIEVELVEEKYWEPSTEFLRRNPAGKVPILKIDGITLSDSTAICEYIEETVPEPALM PRDPAHRAEVRRLVAWFDDKFHAEVTRNLVHERVHKKLMRSGYPDGRAVKAGAQNIKFHIRYMDWLLDHRRWLAGDKMTM ADFTAAAHLSCLDYISDVDWSLSEPVKDWYATIKSRPAFRSILADQIFGFPQPPHYANLDF >Mature_221_residues MNRLYHFPLSPFCRKVRLILAEKRIEVELVEEKYWEPSTEFLRRNPAGKVPILKIDGITLSDSTAICEYIEETVPEPALM PRDPAHRAEVRRLVAWFDDKFHAEVTRNLVHERVHKKLMRSGYPDGRAVKAGAQNIKFHIRYMDWLLDHRRWLAGDKMTM ADFTAAAHLSCLDYISDVDWSLSEPVKDWYATIKSRPAFRSILADQIFGFPQPPHYANLDF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI22202624, Length=176, Percent_Identity=31.8181818181818, Blast_Score=70, Evalue=2e-12, Organism=Escherichia coli, GI1790018, Length=95, Percent_Identity=38.9473684210526, Blast_Score=61, Evalue=5e-11, Organism=Caenorhabditis elegans, GI17556142, Length=81, Percent_Identity=44.4444444444444, Blast_Score=66, Evalue=1e-11, Organism=Drosophila melanogaster, GI21355857, Length=97, Percent_Identity=42.2680412371134, Blast_Score=71, Evalue=6e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.5.1.18
Molecular weight: Translated: 25825; Mature: 25825
Theoretical pI: Translated: 8.11; Mature: 8.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRLYHFPLSPFCRKVRLILAEKRIEVELVEEKYWEPSTEFLRRNPAGKVPILKIDGITL CCCEEECCCCHHHHHHHHHHHHHHHHEEEHHHHCCCCHHHHHHCCCCCCCCEEEECCEEE SDSTAICEYIEETVPEPALMPRDPAHRAEVRRLVAWFDDKFHAEVTRNLVHERVHKKLMR CCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH SGYPDGRAVKAGAQNIKFHIRYMDWLLDHRRWLAGDKMTMADFTAAAHLSCLDYISDVDW CCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCC SLSEPVKDWYATIKSRPAFRSILADQIFGFPQPPHYANLDF CCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MNRLYHFPLSPFCRKVRLILAEKRIEVELVEEKYWEPSTEFLRRNPAGKVPILKIDGITL CCCEEECCCCHHHHHHHHHHHHHHHHEEEHHHHCCCCHHHHHHCCCCCCCCEEEECCEEE SDSTAICEYIEETVPEPALMPRDPAHRAEVRRLVAWFDDKFHAEVTRNLVHERVHKKLMR CCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH SGYPDGRAVKAGAQNIKFHIRYMDWLLDHRRWLAGDKMTMADFTAAAHLSCLDYISDVDW CCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCC SLSEPVKDWYATIKSRPAFRSILADQIFGFPQPPHYANLDF CCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: RX; glutathione
Specific reaction: RX + glutathione = HX + R-S-glutathione
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA