| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89052759
Identifier: 89052759
GI number: 89052759
Start: 276582
End: 277088
Strand: Direct
Name: 89052759
Synonym: Jann_0268
Alternate gene names: NA
Gene position: 276582-277088 (Clockwise)
Preceding gene: 89052758
Following gene: 89052760
Centisome position: 6.41
GC content: 61.34
Gene sequence:
>507_bases ATGGGGCTTAAATCACGTCTTCTGGCGCTGTGCCTGTGTTTGGCAGCCCCTGCCGTTGCACAGGCGCAAGACGCACTTTG GCCTGTCTATGTGCAAGACAATCCGACCCGCTGTTGGATTGTCTCGACGCCCACTGACACGGTGGCCTCTCGTGATGGGC AAGACGTGTCAGATAACATCAGCCGGGACGAAGTGCTTTTGTTCGTGTCGTTCTGGCCCGAGGATGGCCGAGTCGGAGAG ATCAGTTATACTGGCGGATATCAGTTTGCGGTCGGCAGTACGGTGTCGCTTGTTGTAGGGAGCCTTGCGGTTGAGATGTT CACCGAAGGGCCGATGTCCTGGGCAGGGTCCCCCGAAGACGACGCGCGTATCATCGCCGCGATGCGCGACGGATCGGAGG TCGTGGTGACCGCGACCTCCACGCGCGGGACGGAGGTTGCCGACACCTTCAACCCGCAAGGCTTCGCGCTGGCCATGGAT GACGCCCAGGTCCGTTGCGCGCCCTGA
Upstream 100 bases:
>100_bases CGCGCTCCTCTCGCGGAACCCAAACGCAGGACACGTTCAGCCTTCTGGGCTTTACGGCAGCGGTTGAGGATGCAGAGGCC CGCTGCGGGAACTGATCGTC
Downstream 100 bases:
>100_bases GGGGTTTGCGTGGACGCGTGGCCTCCTATATGGGAAGCCAATCCTAGGAAGAGTATTGTTGTCATGACCGCCACTGCGCC TATCACGCAAGACGTTCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 168; Mature: 167
Protein sequence:
>168_residues MGLKSRLLALCLCLAAPAVAQAQDALWPVYVQDNPTRCWIVSTPTDTVASRDGQDVSDNISRDEVLLFVSFWPEDGRVGE ISYTGGYQFAVGSTVSLVVGSLAVEMFTEGPMSWAGSPEDDARIIAAMRDGSEVVVTATSTRGTEVADTFNPQGFALAMD DAQVRCAP
Sequences:
>Translated_168_residues MGLKSRLLALCLCLAAPAVAQAQDALWPVYVQDNPTRCWIVSTPTDTVASRDGQDVSDNISRDEVLLFVSFWPEDGRVGE ISYTGGYQFAVGSTVSLVVGSLAVEMFTEGPMSWAGSPEDDARIIAAMRDGSEVVVTATSTRGTEVADTFNPQGFALAMD DAQVRCAP >Mature_167_residues GLKSRLLALCLCLAAPAVAQAQDALWPVYVQDNPTRCWIVSTPTDTVASRDGQDVSDNISRDEVLLFVSFWPEDGRVGEI SYTGGYQFAVGSTVSLVVGSLAVEMFTEGPMSWAGSPEDDARIIAAMRDGSEVVVTATSTRGTEVADTFNPQGFALAMDD AQVRCAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17898; Mature: 17767
Theoretical pI: Translated: 3.92; Mature: 3.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLKSRLLALCLCLAAPAVAQAQDALWPVYVQDNPTRCWIVSTPTDTVASRDGQDVSDNI CCHHHHHHHHHHHHHCCCHHHHCCCEEEEEEECCCCEEEEEECCCHHHHCCCCCCCCCCC SRDEVLLFVSFWPEDGRVGEISYTGGYQFAVGSTVSLVVGSLAVEMFTEGPMSWAGSPED CCCEEEEEEEECCCCCCEEEEEECCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCC DARIIAAMRDGSEVVVTATSTRGTEVADTFNPQGFALAMDDAQVRCAP CCEEEEEEECCCEEEEEEECCCCCCCCCCCCCCCEEEEECCCEEEECC >Mature Secondary Structure GLKSRLLALCLCLAAPAVAQAQDALWPVYVQDNPTRCWIVSTPTDTVASRDGQDVSDNI CHHHHHHHHHHHHHCCCHHHHCCCEEEEEEECCCCEEEEEECCCHHHHCCCCCCCCCCC SRDEVLLFVSFWPEDGRVGEISYTGGYQFAVGSTVSLVVGSLAVEMFTEGPMSWAGSPED CCCEEEEEEEECCCCCCEEEEEECCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCC DARIIAAMRDGSEVVVTATSTRGTEVADTFNPQGFALAMDDAQVRCAP CCEEEEEEECCCEEEEEEECCCCCCCCCCCCCCCEEEEECCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA