| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89052741
Identifier: 89052741
GI number: 89052741
Start: 247002
End: 247460
Strand: Direct
Name: 89052741
Synonym: Jann_0250
Alternate gene names: NA
Gene position: 247002-247460 (Clockwise)
Preceding gene: 89052740
Following gene: 89052742
Centisome position: 5.72
GC content: 61.22
Gene sequence:
>459_bases ATGAGCATCGCGGACCCGTATCGGACCAGCGGCGTGCTGCATGGGCAATGTCTGTGCAAAGCTGTGCAGATCACCGTGGA TGGGGACTATATTGCCGCCATCGGCATCTGCCATTGCCTGATGTGTCAGCGCAGCAATGGCGTTGTGTTCGGCGCGTTTG AAGCCGCGCCAGGTACTGTGACGGCGACCGGCCCGGTGCAGACCTATGCATCGTCCAGCTTTGCGGAGCGGACGTTTTGC GGCACCTGCGGCAGTGCGCTTTGGCTGCGCGACACGGGGCCGGAGCCTGCGGGATATGAGTTGATGCCGGGGCTGTTCCC GGACGCCCATGACTTCCCGCTGATATCCGAAATTTACCACGACAAAGCGCCCGCCTATCTGCCGTTCAGCGGCGATCACA GGCGCGGGACGCAAGCGCAATACGAATCCAAGAACGCCCATATCGAGGGAGATATCTGA
Upstream 100 bases:
>100_bases TGGAATTCGCGGAGCCCGGAGAACCCGGCTTCCTGACGACACAGCCACAATACGATTGCGGCGACATGATGAGCGGATTG CCAATCATGGAGGACGCGGG
Downstream 100 bases:
>100_bases TGACCCAATTCGACACCGCATGGGCCAAGGCCGAACAGGCGAAGCGTGAGTGGATGGAGCAAAACGGCATGTTCCGCGAG GAGGATGAGCATTCGTCCTG
Product: glutathione-dependent formaldehyde-activating protein
Products: NA
Alternate protein names: Glutamate Synthase; Glutathione-Dependent Formaldehyde-Activating
Number of amino acids: Translated: 152; Mature: 151
Protein sequence:
>152_residues MSIADPYRTSGVLHGQCLCKAVQITVDGDYIAAIGICHCLMCQRSNGVVFGAFEAAPGTVTATGPVQTYASSSFAERTFC GTCGSALWLRDTGPEPAGYELMPGLFPDAHDFPLISEIYHDKAPAYLPFSGDHRRGTQAQYESKNAHIEGDI
Sequences:
>Translated_152_residues MSIADPYRTSGVLHGQCLCKAVQITVDGDYIAAIGICHCLMCQRSNGVVFGAFEAAPGTVTATGPVQTYASSSFAERTFC GTCGSALWLRDTGPEPAGYELMPGLFPDAHDFPLISEIYHDKAPAYLPFSGDHRRGTQAQYESKNAHIEGDI >Mature_151_residues SIADPYRTSGVLHGQCLCKAVQITVDGDYIAAIGICHCLMCQRSNGVVFGAFEAAPGTVTATGPVQTYASSSFAERTFCG TCGSALWLRDTGPEPAGYELMPGLFPDAHDFPLISEIYHDKAPAYLPFSGDHRRGTQAQYESKNAHIEGDI
Specific function: Unknown
COG id: COG3791
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16278; Mature: 16147
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 4.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIADPYRTSGVLHGQCLCKAVQITVDGDYIAAIGICHCLMCQRSNGVVFGAFEAAPGTV CCCCCCCCCCCEEEHHEEEEEEEEEECCCCHHHHHHHHHHHEECCCCEEEEEECCCCCEE TATGPVQTYASSSFAERTFCGTCGSALWLRDTGPEPAGYELMPGLFPDAHDFPLISEIYH EECCCCHHHHCCCHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHH DKAPAYLPFSGDHRRGTQAQYESKNAHIEGDI CCCCEECCCCCCCCCCCCCCCCCCCCEEECCC >Mature Secondary Structure SIADPYRTSGVLHGQCLCKAVQITVDGDYIAAIGICHCLMCQRSNGVVFGAFEAAPGTV CCCCCCCCCCEEEHHEEEEEEEEEECCCCHHHHHHHHHHHEECCCCEEEEEECCCCCEE TATGPVQTYASSSFAERTFCGTCGSALWLRDTGPEPAGYELMPGLFPDAHDFPLISEIYH EECCCCHHHHCCCHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHH DKAPAYLPFSGDHRRGTQAQYESKNAHIEGDI CCCCEECCCCCCCCCCCCCCCCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA