| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89052733
Identifier: 89052733
GI number: 89052733
Start: 235927
End: 236292
Strand: Direct
Name: 89052733
Synonym: Jann_0242
Alternate gene names: NA
Gene position: 235927-236292 (Clockwise)
Preceding gene: 89052732
Following gene: 89052734
Centisome position: 5.46
GC content: 56.01
Gene sequence:
>366_bases ATGGACCGCCGCAAGTTCATCGCCACGTCTGCCGCGCTTCCCTCAGCAGCGCTTGTATCCACAGTCGCCGCCGCATCAGT TGAGGAGCCGCACCAGGGTTGGCTGGACGAATGGCGTGAGATTACTGACTACATCAACAGCTATCCCGACGACGATGCGT ACACAGAGCTATCGCCACGCCTGAGTGAACTTGAGCGTCTTCTGGTCGAAACACCAGCCAACACCCCTCAAGGCATTCTG GCCAAAATTGACTACACGATTGAGGACTATGGCGAATATTTCTTTGGGTGCATCGCAAACGACATGGACCGCAAGATGCT CGCATCGATCCGAGACGCGGTGTCGCTAATGGTGGCGGCTGTATAG
Upstream 100 bases:
>100_bases TGAAGCTCGCTATCGTTGCCTTGAACAACAAGGACCGCTGGACCCAAGCGGACTATGCTCGCATGGACGCCCTGCGCCTA GAGCTGCGGGAGGCAGCATA
Downstream 100 bases:
>100_bases CGAAAATCAGTCGTGCCGATAGGCCGTCTCGGTGGCCACATTGGTCAAGGCGACAATCAAACCGTGATCCAGCAGAGGGG AGCAGGAACACTTTCTATTG
Product: twin-arginine translocation pathway signal
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 121; Mature: 121
Protein sequence:
>121_residues MDRRKFIATSAALPSAALVSTVAAASVEEPHQGWLDEWREITDYINSYPDDDAYTELSPRLSELERLLVETPANTPQGIL AKIDYTIEDYGEYFFGCIANDMDRKMLASIRDAVSLMVAAV
Sequences:
>Translated_121_residues MDRRKFIATSAALPSAALVSTVAAASVEEPHQGWLDEWREITDYINSYPDDDAYTELSPRLSELERLLVETPANTPQGIL AKIDYTIEDYGEYFFGCIANDMDRKMLASIRDAVSLMVAAV >Mature_121_residues MDRRKFIATSAALPSAALVSTVAAASVEEPHQGWLDEWREITDYINSYPDDDAYTELSPRLSELERLLVETPANTPQGIL AKIDYTIEDYGEYFFGCIANDMDRKMLASIRDAVSLMVAAV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13493; Mature: 13493
Theoretical pI: Translated: 4.06; Mature: 4.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRRKFIATSAALPSAALVSTVAAASVEEPHQGWLDEWREITDYINSYPDDDAYTELSPR CCCCHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHCHH LSELERLLVETPANTPQGILAKIDYTIEDYGEYFFGCIANDMDRKMLASIRDAVSLMVAA HHHHHHHHHHCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC V C >Mature Secondary Structure MDRRKFIATSAALPSAALVSTVAAASVEEPHQGWLDEWREITDYINSYPDDDAYTELSPR CCCCHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHCHH LSELERLLVETPANTPQGILAKIDYTIEDYGEYFFGCIANDMDRKMLASIRDAVSLMVAA HHHHHHHHHHCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC V C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA