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The map label for this gene is 89052731

Identifier: 89052731

GI number: 89052731

Start: 234842

End: 235324

Strand: Reverse

Name: 89052731

Synonym: Jann_0240

Alternate gene names: NA

Gene position: 235324-234842 (Counterclockwise)

Preceding gene: 89052735

Following gene: 89052729

Centisome position: 5.45

GC content: 57.14

Gene sequence:

>483_bases
ATGATGTGTCTGGTGGCATCGGCGTTTCCATCCGCAAGCAAGCAGATGACTAAAGTAGTCGCAGCCCTCGGCTTGCTACT
CCTAGCCTTGGCCGCATATGGATGGGTCTCAAGCCCTGCCTCTGCGATACCCGGCACCAGCCTCCCACCCTGCGGCAGTG
GTGAGCGTGTGTCCTGCGTCGTGGACGGTGATACAATCTGGCTGGAGGGCATCAACTACCGGCTTGAGGGCTATGACACG
CCAGAAGAATACAACAATGTCTGTGGCGGGTTTGCGGAGATTGATCTTGCGCGCGCGGCCACTGCGCGACTTGTTGAGCT
ACTCAACCAAGAGGATTGGGAGATGAAGCCTGTTGGACGTTCAGATGCTCACGGCAGAGTGCTGGCGAACCTAATTGTTG
ATGGCGTGGATGTCGGCGACATCCTGATCCGCGAAGGATTGGCGCGTGCCTATCCAGGTGGAGACGAATTTTGGTGCTCA
TGA

Upstream 100 bases:

>100_bases
CGTCTTGACGCCACTCAAGGGGACGTAGGAGGTCGGCACACAACTATTGAAGCGCTTCGCACTACGCTTGAGGGAGCTGG
CATCCAGTTTTTGAAATTGG

Downstream 100 bases:

>100_bases
CCTTTGGATACACTGAATCTATGCTTCGAAATGCAGTCCTGAAAAATAGTTGGTAGGGGTGGTTTCTTTCACCTTTTCAT
CTTTGATCGTCACTGATGCA

Product: nuclease

Products: NA

Alternate protein names: Nuclease Protein; Thermonuclease

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MMCLVASAFPSASKQMTKVVAALGLLLLALAAYGWVSSPASAIPGTSLPPCGSGERVSCVVDGDTIWLEGINYRLEGYDT
PEEYNNVCGGFAEIDLARAATARLVELLNQEDWEMKPVGRSDAHGRVLANLIVDGVDVGDILIREGLARAYPGGDEFWCS

Sequences:

>Translated_160_residues
MMCLVASAFPSASKQMTKVVAALGLLLLALAAYGWVSSPASAIPGTSLPPCGSGERVSCVVDGDTIWLEGINYRLEGYDT
PEEYNNVCGGFAEIDLARAATARLVELLNQEDWEMKPVGRSDAHGRVLANLIVDGVDVGDILIREGLARAYPGGDEFWCS
>Mature_160_residues
MMCLVASAFPSASKQMTKVVAALGLLLLALAAYGWVSSPASAIPGTSLPPCGSGERVSCVVDGDTIWLEGINYRLEGYDT
PEEYNNVCGGFAEIDLARAATARLVELLNQEDWEMKPVGRSDAHGRVLANLIVDGVDVGDILIREGLARAYPGGDEFWCS

Specific function: Unknown

COG id: COG1525

COG function: function code L; Micrococcal nuclease (thermonuclease) homologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17008; Mature: 17008

Theoretical pI: Translated: 4.15; Mature: 4.15

Prosite motif: PS50830 TNASE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMCLVASAFPSASKQMTKVVAALGLLLLALAAYGWVSSPASAIPGTSLPPCGSGERVSCV
CEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEE
VDGDTIWLEGINYRLEGYDTPEEYNNVCGGFAEIDLARAATARLVELLNQEDWEMKPVGR
ECCCEEEEECCCEEECCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
SDAHGRVLANLIVDGVDVGDILIREGLARAYPGGDEFWCS
CCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MMCLVASAFPSASKQMTKVVAALGLLLLALAAYGWVSSPASAIPGTSLPPCGSGERVSCV
CEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEE
VDGDTIWLEGINYRLEGYDTPEEYNNVCGGFAEIDLARAATARLVELLNQEDWEMKPVGR
ECCCEEEEECCCEEECCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
SDAHGRVLANLIVDGVDVGDILIREGLARAYPGGDEFWCS
CCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA