| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is parA [H]
Identifier: 89052693
GI number: 89052693
Start: 194057
End: 194836
Strand: Direct
Name: parA [H]
Synonym: Jann_0202
Alternate gene names: 89052693
Gene position: 194057-194836 (Clockwise)
Preceding gene: 89052692
Following gene: 89052694
Centisome position: 4.49
GC content: 53.59
Gene sequence:
>780_bases ATGCGGGTATTATCTATCACCAACCAAAAGGGTGGCGTCGGGAAGACAACAACGGCAATCAATCTTGGCGCTGCGTTGGC CGCTACTGGTAAGTTTGTCCTGATTGTCGATCTGGACCCGCAGGGCAACGCATCGACTGGTTTGGGCATCGAGGCGCGTT CTCGTAGCAAGACCACATATGATCTTTTGATCGATGGCGCCGCTCTGGAGGACGTGTCGATCCCGACCGAGATTGCAAAT CTGTCCATAGCACCCGCCACCACAGACCTCAGCTCCACTGATGTAGAGCTTGGCCAACGCGACAATCGTATTTTCCTTTT GAAAGAGGCGCTTAGCGAATCCATCGACACGTATGACTATGTGCTCATTGATTGCCCGCCGTCTCTCAGCCTTTTGACCC TAAATGCCCTGGTTGCATCCGATGCTCTCCTTGTCCCGTTGCAGGCGGAATTCTTCGCTTTGGAAGGTCTGTCCCAACTG ATGTTAACGGTGCGCGAGGTTCGCGAGACCGCCAACCCGTCACTGCGTATTGAAGGCGTTGTCCTCACGATGCATGACGC GCGAAACAGGCTCAGCCGACAGGTTGAAGATGACGCTCGCTCTAACCTTGGCGAACTTGTGTTCAACACGATGATACCCA GAAATGTACGGTTGAGTGAGGCACCATCTTTTGCCTTGCCAGCGATCGTCTATGATCCGATGTCGAAAGGTAGCCAGGCC TATCTCGACCTTGCGGAAGAACTCATTGATAGAGAAACCCCCAGACAGGAGGCGTCTTGA
Upstream 100 bases:
>100_bases GATGACTGGCAAGTCAACGCTGAAGTTATCGAGAGCGTAACAGATTCTGATGCTGTCATACTCCGCTTTCGTGGTGCTCA TTTGGAAGGTGAAGGCTAAG
Downstream 100 bases:
>100_bases TGGCTCGTGGCACAGAGAAACGTGGACTTGGACGAGGGCTGTCGGCCCTTATGGCGGATATCGAACCAACAGCCTCAACA CATCCTGACGATGCGCAAAC
Product: chromosome segregation ATPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 259; Mature: 259
Protein sequence:
>259_residues MRVLSITNQKGGVGKTTTAINLGAALAATGKFVLIVDLDPQGNASTGLGIEARSRSKTTYDLLIDGAALEDVSIPTEIAN LSIAPATTDLSSTDVELGQRDNRIFLLKEALSESIDTYDYVLIDCPPSLSLLTLNALVASDALLVPLQAEFFALEGLSQL MLTVREVRETANPSLRIEGVVLTMHDARNRLSRQVEDDARSNLGELVFNTMIPRNVRLSEAPSFALPAIVYDPMSKGSQA YLDLAEELIDRETPRQEAS
Sequences:
>Translated_259_residues MRVLSITNQKGGVGKTTTAINLGAALAATGKFVLIVDLDPQGNASTGLGIEARSRSKTTYDLLIDGAALEDVSIPTEIAN LSIAPATTDLSSTDVELGQRDNRIFLLKEALSESIDTYDYVLIDCPPSLSLLTLNALVASDALLVPLQAEFFALEGLSQL MLTVREVRETANPSLRIEGVVLTMHDARNRLSRQVEDDARSNLGELVFNTMIPRNVRLSEAPSFALPAIVYDPMSKGSQA YLDLAEELIDRETPRQEAS >Mature_259_residues MRVLSITNQKGGVGKTTTAINLGAALAATGKFVLIVDLDPQGNASTGLGIEARSRSKTTYDLLIDGAALEDVSIPTEIAN LSIAPATTDLSSTDVELGQRDNRIFLLKEALSESIDTYDYVLIDCPPSLSLLTLNALVASDALLVPLQAEFFALEGLSQL MLTVREVRETANPSLRIEGVVLTMHDARNRLSRQVEDDARSNLGELVFNTMIPRNVRLSEAPSFALPAIVYDPMSKGSQA YLDLAEELIDRETPRQEAS
Specific function: Involved in chromosome partition. Localize to both poles of the predivisional cell following completion of DNA replication [H]
COG id: COG1192
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the parA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002586 [H]
Pfam domain/function: PF01656 CbiA [H]
EC number: NA
Molecular weight: Translated: 27960; Mature: 27960
Theoretical pI: Translated: 4.26; Mature: 4.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVLSITNQKGGVGKTTTAINLGAALAATGKFVLIVDLDPQGNASTGLGIEARSRSKTTY CEEEEECCCCCCCCCCEEEEECCHHEECCCCEEEEEEECCCCCCCCCCCEEECCCCCCEE DLLIDGAALEDVSIPTEIANLSIAPATTDLSSTDVELGQRDNRIFLLKEALSESIDTYDY EEEEECCCCCCCCCCHHHHCEEECCCCCCCCCCCHHCCCCCCEEEEEHHHHHCCCCCEEE VLIDCPPSLSLLTLNALVASDALLVPLQAEFFALEGLSQLMLTVREVRETANPSLRIEGV EEEECCCCCHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE VLTMHDARNRLSRQVEDDARSNLGELVFNTMIPRNVRLSEAPSFALPAIVYDPMSKGSQA EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCHH YLDLAEELIDRETPRQEAS HHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MRVLSITNQKGGVGKTTTAINLGAALAATGKFVLIVDLDPQGNASTGLGIEARSRSKTTY CEEEEECCCCCCCCCCEEEEECCHHEECCCCEEEEEEECCCCCCCCCCCEEECCCCCCEE DLLIDGAALEDVSIPTEIANLSIAPATTDLSSTDVELGQRDNRIFLLKEALSESIDTYDY EEEEECCCCCCCCCCHHHHCEEECCCCCCCCCCCHHCCCCCCEEEEEHHHHHCCCCCEEE VLIDCPPSLSLLTLNALVASDALLVPLQAEFFALEGLSQLMLTVREVRETANPSLRIEGV EEEECCCCCHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE VLTMHDARNRLSRQVEDDARSNLGELVFNTMIPRNVRLSEAPSFALPAIVYDPMSKGSQA EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCHH YLDLAEELIDRETPRQEAS HHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9054507 [H]