| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89052602
Identifier: 89052602
GI number: 89052602
Start: 100670
End: 101200
Strand: Direct
Name: 89052602
Synonym: Jann_0111
Alternate gene names: NA
Gene position: 100670-101200 (Clockwise)
Preceding gene: 89052601
Following gene: 89052603
Centisome position: 2.33
GC content: 64.41
Gene sequence:
>531_bases ATGCGTCTGCTGCGCAACATCCTGATCGGCCTTGTGTCTCTTGTCGTCGTGCTCGCCATTATCGGCATGTTTCTCCCGCG CTATGTCTCGGTCGAACGCGACATCATGGTGAATGCGGCGCCCGAGGACGTGTATCCGCACGTCAACTCCTTGCAGGCGT TTTCCGAATGGTCGCCCTGGGGCGATATCGACCCGGACATGGTGGTGACCTACTCAGGCCCGGAAGAGGGCGTGGGGAAC GTGATGGAATGGACGTCCGATCACCCGAACGTGGGCAACGGGCGACAGGAGATCCTGGAAGTCGTGGAGAACGAGAGCGT GCGCAGTGCGCTCGACTTCGGCGACATGGGCACGGCTGAGGCGTGGTGGCGGCTGACACCGGACGGGGACAGCACCCGCG TGGTCTGGGGCCTGACCGCGGATATGGGCGGCGGGCCAGTCGGGCGATGGTTCGGCCTGATGATGGACAGCTGGGTCGGC CCGGATTACGAACGTGGGCTGGACCGGTTGCAGGCGTCCGTCGAGGGCTGA
Upstream 100 bases:
>100_bases CGCGCGGAACGGTTCTGACGCCATGCAAACAATTTGGGCGATGGGCGTATCCTATGGTAATGTCGCGCCTAACCTATCGC GTGAAATCTAGGAGGGTCCC
Downstream 100 bases:
>100_bases CTTAACCGGCCATTAACGGGAATCATCACAGCCTGGGGCCATGGAGATGTCTGCGCCCCTTGTTCTCGATCTGCCGCCAG AGACTTTGGCCGCCCTGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: GCN5-Related N-Acetyltransferase; Polyketide Cyclase / Dehydrase And Lipid Transport; DoxX Family Domain-Containing Protein; DoxX Family Protein
Number of amino acids: Translated: 176; Mature: 176
Protein sequence:
>176_residues MRLLRNILIGLVSLVVVLAIIGMFLPRYVSVERDIMVNAAPEDVYPHVNSLQAFSEWSPWGDIDPDMVVTYSGPEEGVGN VMEWTSDHPNVGNGRQEILEVVENESVRSALDFGDMGTAEAWWRLTPDGDSTRVVWGLTADMGGGPVGRWFGLMMDSWVG PDYERGLDRLQASVEG
Sequences:
>Translated_176_residues MRLLRNILIGLVSLVVVLAIIGMFLPRYVSVERDIMVNAAPEDVYPHVNSLQAFSEWSPWGDIDPDMVVTYSGPEEGVGN VMEWTSDHPNVGNGRQEILEVVENESVRSALDFGDMGTAEAWWRLTPDGDSTRVVWGLTADMGGGPVGRWFGLMMDSWVG PDYERGLDRLQASVEG >Mature_176_residues MRLLRNILIGLVSLVVVLAIIGMFLPRYVSVERDIMVNAAPEDVYPHVNSLQAFSEWSPWGDIDPDMVVTYSGPEEGVGN VMEWTSDHPNVGNGRQEILEVVENESVRSALDFGDMGTAEAWWRLTPDGDSTRVVWGLTADMGGGPVGRWFGLMMDSWVG PDYERGLDRLQASVEG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19469; Mature: 19469
Theoretical pI: Translated: 3.98; Mature: 3.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLLRNILIGLVSLVVVLAIIGMFLPRYVSVERDIMVNAAPEDVYPHVNSLQAFSEWSPW CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEECCCHHHCCCHHHHHHHHCCCCC GDIDPDMVVTYSGPEEGVGNVMEWTSDHPNVGNGRQEILEVVENESVRSALDFGDMGTAE CCCCCCEEEEECCCCCHHCHHHHHCCCCCCCCCCHHHHHHHHHCHHHHHHHCCCCCCCCC AWWRLTPDGDSTRVVWGLTADMGGGPVGRWFGLMMDSWVGPDYERGLDRLQASVEG CEEEECCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure MRLLRNILIGLVSLVVVLAIIGMFLPRYVSVERDIMVNAAPEDVYPHVNSLQAFSEWSPW CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEECCCHHHCCCHHHHHHHHCCCCC GDIDPDMVVTYSGPEEGVGNVMEWTSDHPNVGNGRQEILEVVENESVRSALDFGDMGTAE CCCCCCEEEEECCCCCHHCHHHHHCCCCCCCCCCHHHHHHHHHCHHHHHHHCCCCCCCCC AWWRLTPDGDSTRVVWGLTADMGGGPVGRWFGLMMDSWVGPDYERGLDRLQASVEG CEEEECCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA