Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

Click here to switch to the map view.

The map label for this gene is 89052514

Identifier: 89052514

GI number: 89052514

Start: 22565

End: 23596

Strand: Reverse

Name: 89052514

Synonym: Jann_0023

Alternate gene names: NA

Gene position: 23596-22565 (Counterclockwise)

Preceding gene: 89052515

Following gene: 89052512

Centisome position: 0.55

GC content: 48.45

Gene sequence:

>1032_bases
ATGCAAATTATCGGACTAGACCCTGGTGGAAGACCCATATTATCGCTTCCTATATATTACGATGTACCTGATAGCAGGAT
AAGGTTGGACACCTTTATTGGCGTCTCCAAGGGCTATGAAGAACTGATCAATGACCTTGTCGCCGAATTATTCGGTGTTG
AGGTCACAATCCAAATTTATGTCTTACCTCCAGAGGCTGGTTCTCTTCGACAAGTGCTCGGGGTTGTGTTGATCGCAGGA
ATGGGCGGCATACTCGGTACTGGTGGCTGGGAAATGACCCGTGGGTTCACAGAGGGCCTGACGGGGCTTCCACCTGAGGA
ATGGTCGCGACAACTGGGTGAGAACCTGCGGGAAGTAGTCGAATCTGAAGAGAATGCGGGCGAAGTGAACGACGAAGAAC
TACAACAAGTAACTGAGGTGACCTCCACAATTGTTGAAGTCAGTCGGCACATTGTATCCACGCCAACCGAACGTCTTGCT
TCTCAAGGGTTTGAGCCCTCGCAGTATCCCGAAACGTTTAATGCGAAATCAGACATGTTTTATCAGATTGAAGTTGATCC
GCAGATCAGAGGCGTTGGATTTGGGCATGAGCGGGAAGCACCAATACGAAGAGAAGATTTTGGTCGCTATCAGTTGAGTG
CGCGTAAAGAAGAGGATCCAGAGGAATGGAGATTCGAGCTTGTTCGTTATCGCGTTAGTTCACCGAATTGGGACCGGTTT
GATAGCCAAAGAAAGTGGAAGGGCCGCGATCAAGAAGGGTCGATAGTTTACTTTACTATCACAGACGGAAATTTTTGGGA
AATGGCTCGTCATGGCGAGCTCGAATCAAATGTTATCGACGAACTTATAGCGCAGGTCGCAACAAAGTATGTAGATGGGA
AACGAACGGACCGTGTGGTCATTAGTGTGATTAGGTTCAACGATCGACCAGTGTCTCCGGAACTTACGCGCACTCAGTTG
GGCCACATACTCGACCTTACTGTGAAGGACATTGGCGAGGGGACTAATTCGCTTTTTGACGACGATCTTTAA

Upstream 100 bases:

>100_bases
CACGATTCTGATCCCTTGCGCTAGCTAACCTGAGTTTGCTTTCTTGCAAAAACTCAACGTTAACGGCATTGATTAAGTCA
GTTTTTCATAAGGTAGCGTT

Downstream 100 bases:

>100_bases
ACCACCACCTCCACCCGTTCCTGCTCGCCAACCCCGAACACCCGCTTATACCGCTCGATCTGATCCGCAGGCCCCATGGC
CTTTTCGGGGTTGTCGCTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 343; Mature: 343

Protein sequence:

>343_residues
MQIIGLDPGGRPILSLPIYYDVPDSRIRLDTFIGVSKGYEELINDLVAELFGVEVTIQIYVLPPEAGSLRQVLGVVLIAG
MGGILGTGGWEMTRGFTEGLTGLPPEEWSRQLGENLREVVESEENAGEVNDEELQQVTEVTSTIVEVSRHIVSTPTERLA
SQGFEPSQYPETFNAKSDMFYQIEVDPQIRGVGFGHEREAPIRREDFGRYQLSARKEEDPEEWRFELVRYRVSSPNWDRF
DSQRKWKGRDQEGSIVYFTITDGNFWEMARHGELESNVIDELIAQVATKYVDGKRTDRVVISVIRFNDRPVSPELTRTQL
GHILDLTVKDIGEGTNSLFDDDL

Sequences:

>Translated_343_residues
MQIIGLDPGGRPILSLPIYYDVPDSRIRLDTFIGVSKGYEELINDLVAELFGVEVTIQIYVLPPEAGSLRQVLGVVLIAG
MGGILGTGGWEMTRGFTEGLTGLPPEEWSRQLGENLREVVESEENAGEVNDEELQQVTEVTSTIVEVSRHIVSTPTERLA
SQGFEPSQYPETFNAKSDMFYQIEVDPQIRGVGFGHEREAPIRREDFGRYQLSARKEEDPEEWRFELVRYRVSSPNWDRF
DSQRKWKGRDQEGSIVYFTITDGNFWEMARHGELESNVIDELIAQVATKYVDGKRTDRVVISVIRFNDRPVSPELTRTQL
GHILDLTVKDIGEGTNSLFDDDL
>Mature_343_residues
MQIIGLDPGGRPILSLPIYYDVPDSRIRLDTFIGVSKGYEELINDLVAELFGVEVTIQIYVLPPEAGSLRQVLGVVLIAG
MGGILGTGGWEMTRGFTEGLTGLPPEEWSRQLGENLREVVESEENAGEVNDEELQQVTEVTSTIVEVSRHIVSTPTERLA
SQGFEPSQYPETFNAKSDMFYQIEVDPQIRGVGFGHEREAPIRREDFGRYQLSARKEEDPEEWRFELVRYRVSSPNWDRF
DSQRKWKGRDQEGSIVYFTITDGNFWEMARHGELESNVIDELIAQVATKYVDGKRTDRVVISVIRFNDRPVSPELTRTQL
GHILDLTVKDIGEGTNSLFDDDL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38859; Mature: 38859

Theoretical pI: Translated: 4.28; Mature: 4.28

Prosite motif: PS00175 PG_MUTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIIGLDPGGRPILSLPIYYDVPDSRIRLDTFIGVSKGYEELINDLVAELFGVEVTIQIY
CEEEECCCCCCCEEEEEEEEECCCCCEEEHHHHCCCCCHHHHHHHHHHHHHCCEEEEEEE
VLPPEAGSLRQVLGVVLIAGMGGILGTGGWEMTRGFTEGLTGLPPEEWSRQLGENLREVV
EECCCCCHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
ESEENAGEVNDEELQQVTEVTSTIVEVSRHIVSTPTERLASQGFEPSQYPETFNAKSDMF
HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCEE
YQIEVDPQIRGVGFGHEREAPIRREDFGRYQLSARKEEDPEEWRFELVRYRVSSPNWDRF
EEEEECCCEEECCCCCCCCCCCCHHHCCCEEECCCCCCCHHHHHHHHHHHHCCCCCCCCC
DSQRKWKGRDQEGSIVYFTITDGNFWEMARHGELESNVIDELIAQVATKYVDGKRTDRVV
CCCHHCCCCCCCCCEEEEEECCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCEE
ISVIRFNDRPVSPELTRTQLGHILDLTVKDIGEGTNSLFDDDL
EEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCHHCCCCCCC
>Mature Secondary Structure
MQIIGLDPGGRPILSLPIYYDVPDSRIRLDTFIGVSKGYEELINDLVAELFGVEVTIQIY
CEEEECCCCCCCEEEEEEEEECCCCCEEEHHHHCCCCCHHHHHHHHHHHHHCCEEEEEEE
VLPPEAGSLRQVLGVVLIAGMGGILGTGGWEMTRGFTEGLTGLPPEEWSRQLGENLREVV
EECCCCCHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
ESEENAGEVNDEELQQVTEVTSTIVEVSRHIVSTPTERLASQGFEPSQYPETFNAKSDMF
HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCEE
YQIEVDPQIRGVGFGHEREAPIRREDFGRYQLSARKEEDPEEWRFELVRYRVSSPNWDRF
EEEEECCCEEECCCCCCCCCCCCHHHCCCEEECCCCCCCHHHHHHHHHHHHCCCCCCCCC
DSQRKWKGRDQEGSIVYFTITDGNFWEMARHGELESNVIDELIAQVATKYVDGKRTDRVV
CCCHHCCCCCCCCCEEEEEECCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCEE
ISVIRFNDRPVSPELTRTQLGHILDLTVKDIGEGTNSLFDDDL
EEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA